RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 CHORDC1Q9UHD1 332 aaPredicted RBP9.43□□□□□ -0.9
PVT1-207ENST00000518528 SIX4Q9UIU6 781 aa9.43□□□□□ -0.9
PVT1-207ENST00000518528 ANKRD6Q9Y2G4 727 aa9.43□□□□□ -0.9
PVT1-207ENST00000518528 PCDHB13Q9Y5F0 798 aa9.43□□□□□ -0.9
PVT1-207ENST00000518528 SNX11Q9Y5W9 270 aa9.43□□□□□ -0.9
PVT1-207ENST00000518528 KNL1Q8NG31 2342 aa9.43□□□□□ -0.9
PVT1-207ENST00000518528 PTPRQQ9UMZ3 2332 aa9.43□□□□□ -0.9
PVT1-207ENST00000518528 WDFY3Q8IZQ1 3526 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 ENC1O14682 589 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 KIAA0391O15091 583 aaKnown RBP9.42□□□□□ -0.9
PVT1-207ENST00000518528 TACC1O75410 805 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 RFPL3O75679 317 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 IGLV3-19P01714 112 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 GAP43P17677 238 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 UCNP55089 124 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 CDH8P55286 799 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 C21orf59P57076 290 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 TNNC1P63316 161 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 CXADRP78310 365 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 ARID5AQ03989 594 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 ALCAMQ13740 583 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 L1TD1Q5T7N2 865 aaKnown RBP9.42□□□□□ -0.9
PVT1-207ENST00000518528 BROXQ5VW32 411 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 CXorf38Q8TB03 319 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 TMEM176AQ96HP8 235 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 ARID3AQ99856 593 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 MED10Q9BTT4 135 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 ZNF518BQ9C0D4 1074 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 MKRN2Q9H000 416 aaKnown RBP9.42□□□□□ -0.9
PVT1-207ENST00000518528 CCSER2Q9H7U1 834 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 PDE11AQ9HCR9 933 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 INTS13Q9NVM9 706 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 GMIPQ9P107 970 aa9.42□□□□□ -0.9
PVT1-207ENST00000518528 CABIN1Q9Y6J0 2220 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 CFAP46Q8IYW2 2715 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 SCN1AP35498 2009 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 PTPRJQ12913 1337 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 TSC2P49815 1807 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 GOLGA8IPA6NC78 632 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 ZNF233A6NK53 670 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 GOLGA8JA6NMD2 632 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 WASH3PC4AMC7 463 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 YKT6O15498 198 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 TIMM44O43615 452 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 TLX3O43711 291 aaPredicted RBP9.41□□□□□ -0.9
PVT1-207ENST00000518528 TLR5O60602 858 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 GCNT3O95395 438 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 LDOC1O95751 146 aaPredicted RBP9.41□□□□□ -0.9
PVT1-207ENST00000518528 BMP15O95972 392 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 CISD3P0C7P0 127 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 DDIT3P35638 169 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 ATP5C1P36542 298 aaKnown RBP9.41□□□□□ -0.9
PVT1-207ENST00000518528 BCAT1P54687 386 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 TARDBPQ13148 414 aaKnown RBP eCLIP9.41□□□□□ -0.91e-6■■■■□ 23.1
PVT1-207ENST00000518528 RTP5Q14D33 572 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 FAM124AQ86V42 546 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 SFR1Q86XK3 245 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 B3GALNT2Q8NCR0 500 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 C1orf216Q8TAB5 229 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 LARP4BQ92615 738 aaKnown RBP9.41□□□□□ -0.9
PVT1-207ENST00000518528 ZSCAN31Q96LW9 406 aaPredicted RBP9.41□□□□□ -0.9
PVT1-207ENST00000518528 FBXO44Q9H4M3 255 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 TM9SF3Q9HD45 589 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 DMAP1Q9NPF5 467 aaPredicted RBP9.41□□□□□ -0.9
PVT1-207ENST00000518528 TLR8Q9NR97 1041 aaKnown RBP9.41□□□□□ -0.9
PVT1-207ENST00000518528 BLOC1S4Q9NUP1 217 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 THAP10Q9P2Z0 257 aaPredicted RBP9.41□□□□□ -0.9
PVT1-207ENST00000518528 ZNF510Q9Y2H8 683 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 SLC27A6Q9Y2P4 619 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 PLXND1Q9Y4D7 1925 aa9.41□□□□□ -0.9
PVT1-207ENST00000518528 TNRC6BQ9UPQ9 1833 aaKnown RBP9.4□□□□□ -0.9
PVT1-207ENST00000518528 MYO18AQ92614 2054 aaKnown RBP9.4□□□□□ -0.9
PVT1-207ENST00000518528 A8MXQ7 604 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 KCNJ18B7U540 433 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 H0Y8X5 98 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 PAPSS1O43252 624 aaPredicted RBP9.4□□□□□ -0.9
PVT1-207ENST00000518528 ITGAVP06756 1048 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 TRIM21P19474 475 aaKnown RBP9.4□□□□□ -0.9
PVT1-207ENST00000518528 ABCB4P21439 1286 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 CD27P26842 260 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 LONP1P36776 959 aaKnown RBP9.4□□□□□ -0.9
PVT1-207ENST00000518528 IL12RB1P42701 662 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 SLC5A3P53794 718 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 WNT7BP56706 349 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 TLE3Q04726 772 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 CCDC173Q0VFZ6 552 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 ST3GAL1Q11201 340 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 ILKQ13418 452 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 EIF4HQ15056 248 aaKnown RBP9.4□□□□□ -0.9
PVT1-207ENST00000518528 HES3Q5TGS1 186 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 ANKS1BQ7Z6G8 1248 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 TADA2BQ86TJ2 420 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 GPD1LQ8N335 351 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 SCAMP5Q8TAC9 235 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 BHMTQ93088 406 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 SMARCD1Q96GM5 515 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 CNDP2Q96KP4 475 aaKnown RBP9.4□□□□□ -0.9
PVT1-207ENST00000518528 TNIP3Q96KP6 325 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 LGMNQ99538 433 aa9.4□□□□□ -0.9
PVT1-207ENST00000518528 MRPL45Q9BRJ2 306 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms