RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.1□□□□□ -0.63
SPIDR-205ENST00000518060 SLC12A8A0AV02 714 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 PRR5-ARHGAP8B1AHC4 643 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 M0QYV0 167 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 SGK1O00141 431 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 TULP2O00295 520 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 PIK3R2O00459 728 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 XPO1O14980 1071 aaKnown RBP11.1□□□□□ -0.63
SPIDR-205ENST00000518060 FGFR1OPO95684 399 aaKnown RBP11.1□□□□□ -0.63
SPIDR-205ENST00000518060 ZBED1O96006 694 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 AFPP02771 609 aaKnown RBP11.1□□□□□ -0.63
SPIDR-205ENST00000518060 VDRP11473 427 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 KRT5P13647 590 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 LCP1P13796 627 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 TYRP14679 529 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 CORO1AP31146 461 aaKnown RBP11.1□□□□□ -0.63
SPIDR-205ENST00000518060 ANP32AP39687 249 aaKnown RBP11.1□□□□□ -0.63
SPIDR-205ENST00000518060 WASP42768 502 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 RGS7P49802 495 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 ARHGAP8P85298 464 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 PUM1Q14671 1186 aaKnown RBP eCLIP11.1□□□□□ -0.63
SPIDR-205ENST00000518060 CRY1Q16526 586 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 USP39Q53GS9 565 aaKnown RBP11.1□□□□□ -0.63
SPIDR-205ENST00000518060 EMC10Q5UCC4 262 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 HTR3DQ70Z44 454 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 RRAGAQ7L523 313 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 ZNF513Q8N8E2 541 aaPredicted RBP11.1□□□□□ -0.63
SPIDR-205ENST00000518060 TERB1Q8NA31 727 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 C12orf50Q8NA57 414 aaPredicted RBP11.1□□□□□ -0.63
SPIDR-205ENST00000518060 RBBP8NLQ8NC74 664 aaPredicted RBP11.1□□□□□ -0.63
SPIDR-205ENST00000518060 RNF139Q8WU17 664 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 HMGB4Q8WW32 186 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 NDRG1Q92597 394 aaKnown RBP11.1□□□□□ -0.63
SPIDR-205ENST00000518060 KAT5Q92993 513 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 SRRTQ9BXP5 876 aaKnown RBP11.1□□□□□ -0.63
SPIDR-205ENST00000518060 ARRDC1-AS1Q9H2J1 176 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 FAM124BQ9H5Z6 455 aaPredicted RBP11.1□□□□□ -0.63
SPIDR-205ENST00000518060 POLMQ9NP87 494 aaPredicted RBP11.1□□□□□ -0.63
SPIDR-205ENST00000518060 PLK2Q9NYY3 685 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 CLIC5Q9NZA1 410 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 MARCH2Q9P0N8 246 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 WDR35Q9P2L0 1181 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 USP3Q9Y6I4 520 aa11.1□□□□□ -0.63
SPIDR-205ENST00000518060 TCRBV21S2A2A0A5A6 115 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 O00370 1275 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 TRIM24O15164 1050 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 ZBTB24O43167 697 aaPredicted RBP11.09□□□□□ -0.63
SPIDR-205ENST00000518060 STC2O76061 302 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 RHOBTB1O94844 696 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 CALCAP01258 141 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 SETSIPP0DME0 302 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 SDHBP21912 280 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 BRD2P25440 801 aaKnown RBP11.09□□□□□ -0.63
SPIDR-205ENST00000518060 TNFRSF4P43489 277 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 MCCD1P59942 119 aaPredicted RBP11.09□□□□□ -0.63
SPIDR-205ENST00000518060 COG7P83436 770 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 CREB5Q02930 508 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 CSRP2Q16527 193 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 TPD52L1Q16890 204 aaPredicted RBP11.09□□□□□ -0.63
SPIDR-205ENST00000518060 KLHDC10Q6PID8 442 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 PRR23CQ6ZRP0 262 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 TRMT11Q7Z4G4 463 aaKnown RBP11.09□□□□□ -0.63
SPIDR-205ENST00000518060 ETFBKMTQ8IXQ9 262 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 IL17RCQ8NAC3 791 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 MDGA1Q8NFP4 955 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 EDEM1Q92611 657 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 GOLGA1Q92805 767 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 SPACA7Q96KW9 195 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 CNOT6LQ96LI5 555 aaKnown RBP11.09□□□□□ -0.63
SPIDR-205ENST00000518060 UBXN6Q9BZV1 441 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 INTS2Q9H0H0 1204 aaKnown RBP11.09□□□□□ -0.63
SPIDR-205ENST00000518060 EBF1Q9UH73 591 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 KIAA1257Q9ULG3 409 aa11.09□□□□□ -0.63
SPIDR-205ENST00000518060 P4HA2O15460 535 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 MAP3K13O43283 966 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 LRP3O75074 770 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 EPN2O95208 641 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 CYBBP04839 570 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 PAEPP09466 180 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 HOXB2P14652 356 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 MPLP40238 635 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 DGKGP49619 791 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 FOXK2Q01167 660 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 KCNH2Q12809 1159 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 SF3A2Q15428 464 aaKnown RBP11.08□□□□□ -0.64
SPIDR-205ENST00000518060 PLK5Q496M5 336 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 HSF5Q4G112 596 aaPredicted RBP11.08□□□□□ -0.64
SPIDR-205ENST00000518060 SDE2Q6IQ49 451 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 TMEM92Q6UXU6 159 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 TOGARAM2Q6ZUX3 1019 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 ERMP1Q7Z2K6 904 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 DENND1CQ8IV53 801 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 FMNL3Q8IVF7 1028 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 ARHGEF19Q8IW93 802 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 TRIM59Q8IWR1 403 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 CHPFQ8IZ52 775 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 TRIML1Q8N9V2 468 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 RLN3Q8WXF3 142 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 TFAP2BQ92481 460 aa11.08□□□□□ -0.64
SPIDR-205ENST00000518060 DCLK3Q9C098 648 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms