RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 KCNK16Q96T55 309 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 B3GNT5Q9BYG0 378 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 DPEP3Q9H4B8 488 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 FBXO44Q9H4M3 255 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 IL21RQ9HBE5 538 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 ITM2CQ9NQX7 267 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 TLR8Q9NR97 1041 aaKnown RBP12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 GMIPQ9P107 970 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 FNDC3AQ9Y2H6 1198 aaKnown RBP12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 NME7Q9Y5B8 376 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 SHROOM3Q8TF72 1996 aa12.12□□□□□ -0.47
TRAPPC9-203ENST00000517667 CFAP46Q8IYW2 2715 aa12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 TMEM131Q92545 1883 aa12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 METTL12A8MUP2 240 aa12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 CLDN5O00501 218 aa12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 ZIC2O95409 532 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 STAU1O95793 577 aaKnown RBP12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 DLATP10515 647 aaKnown RBP12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 TNNI1P19237 187 aa12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 ATICP31939 592 aa12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 TPMTP51580 245 aa12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 AFF3P51826 1226 aaKnown RBP12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 CAMK2BQ13554 666 aa12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 SMAD1Q15797 465 aaKnown RBP12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 FAM35AQ86V20 835 aa12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 CGRRF1Q99675 332 aa12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 MED10Q9BTT4 135 aa12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 PCED1AQ9H1Q7 454 aa12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 PANK4Q9NVE7 773 aa12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 HSPBP1Q9NZL4 362 aa12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 STON1Q9Y6Q2 735 aa12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 MAST4O15021 2626 aa12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 CKAP5Q14008 2032 aa12.11□□□□□ -0.47
TRAPPC9-203ENST00000517667 MUC22E2RYF6 1773 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 TENM4Q6N022 2769 aa12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 TNFSF14O43557 240 aa12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 SYNCRIPO60506 623 aaKnown RBP12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 GREM1O60565 184 aa12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 CST3P01034 146 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 IGLV3-19P01714 112 aa12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 ACADMP11310 421 aa12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 ATP5C1P36542 298 aaKnown RBP12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 GRK6P43250 576 aa12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 TRPC3Q13507 836 aa12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 SNRNP35Q16560 246 aaKnown RBP12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 INAVAQ3KP66 663 aa12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 CCDC73Q6ZRK6 1079 aa12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 LSM14AQ8ND56 463 aaKnown RBP12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 UCMAQ8WVF2 138 aa12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 PRCCQ92733 491 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 WBP2Q969T9 261 aa12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 SYAP1Q96A49 352 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 SIPA1Q96FS4 1042 aa12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 NUP58Q9BVL2 599 aa12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 KLF16Q9BXK1 252 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 FGFBP2Q9BYJ0 223 aa12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 MKRN2Q9H000 416 aaKnown RBP12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 CYLDQ9NQC7 956 aa12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 KRT82Q9NSB4 513 aa12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 EIF2B4Q9UI10 523 aaKnown RBP12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 SLC27A6Q9Y2P4 619 aa12.1□□□□□ -0.47
TRAPPC9-203ENST00000517667 COL5A1P20908 1838 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 GOLGA8CPA6NN73 597 aa12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 KCNJ18B7U540 433 aa12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 WASH3PC4AMC7 463 aa12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 ATXN7O15265 892 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 AP1G2O75843 785 aa12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 CISD3P0C7P0 127 aa12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 HLA-EP13747 358 aa12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 ACO1P21399 889 aaKnown RBP12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 CDH8P55286 799 aa12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 BNC1Q01954 994 aa12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 ENPP2Q13822 863 aa12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 PSMD6Q15008 389 aa12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 TEAD4Q15561 434 aa12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 KLHDC10Q6PID8 442 aa12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 USP49Q70CQ1 688 aa12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 TMPRSS6Q8IU80 811 aa12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 CCDC65Q8IXS2 484 aa12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 SLC39A7Q92504 469 aa12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 NXPE2Q96DL1 559 aa12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 DCBLD2Q96PD2 775 aa12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 THAP10Q9P2Z0 257 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 NXF1Q9UBU9 619 aaKnown RBP12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 FBXO10Q9UK96 956 aa12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 GOLGA4Q13439 2230 aaKnown RBP12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 TP53BP1Q12888 1972 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC9-203ENST00000517667 A0A1B0GVT2 93 aa12.08□□□□□ -0.48
TRAPPC9-203ENST00000517667 PCDHGA12O60330 932 aa12.08□□□□□ -0.48
TRAPPC9-203ENST00000517667 CLSTN1O94985 981 aa12.08□□□□□ -0.48
TRAPPC9-203ENST00000517667 HNF1BP35680 557 aa12.08□□□□□ -0.48
TRAPPC9-203ENST00000517667 STAT6P42226 847 aa12.08□□□□□ -0.48
TRAPPC9-203ENST00000517667 IL12RB1P42701 662 aa12.08□□□□□ -0.48
TRAPPC9-203ENST00000517667 GRIA4P48058 902 aa12.08□□□□□ -0.48
TRAPPC9-203ENST00000517667 CCT8P50990 548 aa12.08□□□□□ -0.48
TRAPPC9-203ENST00000517667 ORC1Q13415 861 aa12.08□□□□□ -0.48
TRAPPC9-203ENST00000517667 EIF4HQ15056 248 aaKnown RBP12.08□□□□□ -0.48
TRAPPC9-203ENST00000517667 PTPRNQ16849 979 aa12.08□□□□□ -0.48
TRAPPC9-203ENST00000517667 LARP1BQ659C4 914 aaKnown RBP12.08□□□□□ -0.48
TRAPPC9-203ENST00000517667 LRRC69Q6ZNQ3 347 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms