RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 GRAMD1BQ3KR37 738 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 FASTKD1Q53R41 847 aaKnown RBP12.81□□□□□ -0.36
PCM1-203ENST00000517545 VWA5B1Q5TIE3 1220 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 UNC5AQ6ZN44 842 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 MPP5Q8N3R9 675 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 CMASQ8NFW8 434 aaPredicted RBP12.81□□□□□ -0.36
PCM1-203ENST00000517545 ATP6V0A1Q93050 837 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 THAP1Q9NVV9 213 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 GALNT8Q9NY28 637 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 SCAF8Q9UPN6 1271 aaKnown RBP12.81□□□□□ -0.36
PCM1-203ENST00000517545 UBR3Q6ZT12 1888 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 hCG_2014768A0A024R1R8 64 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 C15orf38-AP3S2A0A0A6YYH1 394 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 CHADO15335 359 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 KCNN4O15554 427 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 HNRNPRO43390 633 aaKnown RBP12.81□□□□□ -0.36
PCM1-203ENST00000517545 PIM1P11309 404 aaPredicted RBP12.81□□□□□ -0.36
PCM1-203ENST00000517545 CHN2P52757 468 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 FKBP1AP62942 108 aaKnown RBP12.81□□□□□ -0.36
PCM1-203ENST00000517545 FOLH1Q04609 750 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 EMC2Q15006 297 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 NOMO1Q15155 1222 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 PGM2L1Q6PCE3 622 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 ARPINQ7Z6K5 226 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 TMEM130Q8N3G9 435 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 USP29Q9HBJ7 922 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 HSFX1Q9UBD0 423 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 USP18Q9UMW8 372 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 POMPQ9Y244 141 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 MAD1L1Q9Y6D9 718 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 ATG7O95352 703 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 ASLP04424 464 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 ERBB2P04626 1255 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 OSBPP22059 807 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 CDH5P33151 784 aaPredicted RBP12.81□□□□□ -0.36
PCM1-203ENST00000517545 SCNN1BP51168 640 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 SMAD1Q15797 465 aaKnown RBP12.81□□□□□ -0.36
PCM1-203ENST00000517545 ANKRD20A4Q4UJ75 823 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 ZBTB33Q86T24 672 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 UNC5BQ8IZJ1 945 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 DEFB107AQ8IZN7 70 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 ZNF518BQ9C0D4 1074 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 SLC15A5A6NIM6 579 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 PDLIM1O00151 329 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 APOEP02649 317 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 CRHR1P34998 444 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 GMPRP36959 345 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 RAP1GAPP47736 663 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 CDH6P55285 790 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 TGFB2P61812 414 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 R3HDM1Q15032 1099 aaKnown RBP12.8□□□□□ -0.36
PCM1-203ENST00000517545 TLR1Q15399 786 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 TEDDM1Q5T9Z0 273 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 LGSNQ5TDP6 509 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 DEPTORQ8TB45 409 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 PIWIL2Q8TC59 973 aaKnown RBP12.8□□□□□ -0.36
PCM1-203ENST00000517545 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.8□□□□□ -0.36
PCM1-203ENST00000517545 PNPOQ9NVS9 261 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 TMOD2Q9NZR1 351 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 ADGRA2Q96PE1 1338 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.8□□□□□ -0.36
PCM1-203ENST00000517545 H3BNX3 289 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 VILLO15195 856 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 TRUB2O95900 331 aaKnown RBP12.8□□□□□ -0.36
PCM1-203ENST00000517545 RBL1P28749 1068 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 ARRB2P32121 409 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 DEUP1Q05D60 604 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 MYBPC3Q14896 1274 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 TMC7Q7Z402 723 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 WDR75Q8IWA0 830 aaKnown RBP12.8□□□□□ -0.36
PCM1-203ENST00000517545 NIF3L1Q9GZT8 377 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 PCDHGC3Q9UN70 934 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 INPP5FQ9Y2H2 1132 aa12.8□□□□□ -0.36
PCM1-203ENST00000517545 SF3B1O75533 1304 aaKnown RBP eCLIP12.8□□□□□ -0.36
PCM1-203ENST00000517545 MYOCOSA0A1B0GUC4 107 aa12.79□□□□□ -0.36
PCM1-203ENST00000517545 PIK3R2O00459 728 aa12.79□□□□□ -0.36
PCM1-203ENST00000517545 KRT38O76015 456 aa12.79□□□□□ -0.36
PCM1-203ENST00000517545 RGS20O76081 388 aa12.79□□□□□ -0.36
PCM1-203ENST00000517545 CD1EP15812 388 aa12.79□□□□□ -0.36
PCM1-203ENST00000517545 L1CAMP32004 1257 aa12.79□□□□□ -0.36
PCM1-203ENST00000517545 CDK18Q07002 472 aa12.79□□□□□ -0.36
PCM1-203ENST00000517545 MBLAC2Q68D91 279 aa12.79□□□□□ -0.36
PCM1-203ENST00000517545 RBM44Q6ZP01 1051 aaKnown RBP12.79□□□□□ -0.36
PCM1-203ENST00000517545 FRMD7Q6ZUT3 714 aa12.79□□□□□ -0.36
PCM1-203ENST00000517545 XYLT1Q86Y38 959 aa12.79□□□□□ -0.36
PCM1-203ENST00000517545 PHTF2Q8N3S3 785 aa12.79□□□□□ -0.36
PCM1-203ENST00000517545 ZNF526Q8TF50 670 aaPredicted RBP12.79□□□□□ -0.36
PCM1-203ENST00000517545 TFB1MQ8WVM0 346 aaKnown RBP12.79□□□□□ -0.36
PCM1-203ENST00000517545 MIS12Q9H081 205 aa12.79□□□□□ -0.36
PCM1-203ENST00000517545 MKS1Q9NXB0 559 aa12.79□□□□□ -0.36
PCM1-203ENST00000517545 EMCNQ9ULC0 261 aa12.79□□□□□ -0.36
PCM1-203ENST00000517545 APOBEC2Q9Y235 224 aaKnown RBP12.79□□□□□ -0.36
PCM1-203ENST00000517545 HEY1Q9Y5J3 304 aa12.79□□□□□ -0.36
PCM1-203ENST00000517545 RGPD3A6NKT7 1758 aaPredicted RBP12.79□□□□□ -0.36
PCM1-203ENST00000517545 RGPD4Q7Z3J3 1758 aa12.79□□□□□ -0.36
PCM1-203ENST00000517545 ITGA2BP08514 1039 aa12.79□□□□□ -0.36
PCM1-203ENST00000517545 FGF3P11487 239 aaPredicted RBP12.79□□□□□ -0.36
PCM1-203ENST00000517545 KCNA2P16389 499 aa12.79□□□□□ -0.36
PCM1-203ENST00000517545 ITGAXP20702 1163 aa12.79□□□□□ -0.36
PCM1-203ENST00000517545 ADORA2AP29274 412 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms