RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 TNFAIP2Q03169 654 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 MGAT5Q09328 741 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 RNASE12Q5GAN4 147 aaKnown RBP-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 EARS2Q5JPH6 523 aaKnown RBP-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 CC2D1BQ5T0F9 858 aaKnown RBP-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 OTUD1Q5VV17 481 aaPredicted RBP-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 AFMIDQ63HM1 303 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 ZNF613Q6PF04 617 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 LCTLQ6UWM7 567 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 LMBR1LQ6UX01 489 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 UNQ6126/PRO20091Q6UXV3 157 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 Q6ZWC4 215 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 TUBA1AQ71U36 451 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 ZNF534Q76KX8 674 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 ZNF227Q86WZ6 799 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 NOSTRINQ8IVI9 506 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 GPD1LQ8N335 351 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 Q8N377 158 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 ZNF441Q8N8Z8 693 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 PUM2Q8TB72 1066 aaKnown RBP eCLIP-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 WDR20Q8TBZ3 569 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 KCTD13Q8WZ19 329 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 FBXW5Q969U6 566 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 FAM136AQ96C01 138 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 FERD3LQ96RJ6 166 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 PKP2Q99959 881 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 PIGQQ9BRB3 760 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 THAP7Q9BT49 309 aaPredicted RBP-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 AMBRA1Q9C0C7 1298 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 SERHLQ9NQF3 203 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 SLTMQ9NWH9 1034 aaKnown RBP eCLIP-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 VSX1Q9NZR4 365 aaPredicted RBP-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 RASAL2Q9UJF2 1139 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 SH2B3Q9UQQ2 575 aa-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 SIRT4Q9Y6E7 314 aaPredicted RBP-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 GREB1LQ9C091 1923 aaPredicted RBP-0.77□□□□□ -2.53
SNORA40.16-201ENST00000517238 FAM205AQ6ZU69 1335 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 A0A1W2PR48 441 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 A6NNC1 897 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 SERPINE3A8MV23 424 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 PPM1DO15297 605 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 SLC16A3O15427 465 aaKnown RBP-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 HIP1RO75146 1068 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 APOL3O95236 402 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 BRD1O95696 1058 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 LTA4HP09960 611 aaKnown RBP-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 ZCCHC18P0CG32 403 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 ALOX15P16050 662 aaPredicted RBP-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 CPEP16870 476 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 CANXP27824 592 aaKnown RBP-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 CHRNB4P30926 498 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 CRHR1P34998 444 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 ZNF132P52740 706 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 GNB1P62873 340 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 MS4A2Q01362 244 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 GAD2Q05329 585 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 ADCY2Q08462 1091 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 RAPSNQ13702 412 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 GPR18Q14330 331 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 MYBPC3Q14896 1274 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 SMTNL2Q2TAL5 461 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 KRTAP21-3Q3LHN1 58 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 DNTTIP2Q5QJE6 756 aaKnown RBP-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 FBXO46Q6PJ61 603 aaPredicted RBP-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 ZNF572Q7Z3I7 529 aaPredicted RBP-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 ENTHD1Q8IYW4 607 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 DSELQ8IZU8 1212 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 CADM3Q8N126 398 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 EFHBQ8N7U6 833 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 JMYQ8N9B5 988 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 KLHL30-AS1Q8NEE0 82 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 OR10V1Q8NGI7 309 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 OR13A1Q8NGR1 328 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 OR14A16Q8NHC5 309 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 SSC4DQ8WTU2 575 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 TMEM171Q8WVE6 324 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 ZNRF4Q8WWF5 429 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 SGF29Q96ES7 293 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 BICD1Q96G01 975 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 LENG8Q96PV6 779 aaPredicted RBP-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 OSBPL9Q96SU4 736 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 KLF6Q99612 283 aaPredicted RBP-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 GAREM1Q9H706 876 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 FBRSL1Q9HCM7 1045 aaKnown RBP-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 PAPOLBQ9NRJ5 636 aaKnown RBP-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 AGO2Q9UKV8 859 aaKnown RBP-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 VSIG4Q9Y279 399 aa-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 CHTOPQ9Y3Y2 248 aaKnown RBP-0.78□□□□□ -2.53
SNORA40.16-201ENST00000517238 E7ENX8 843 aa-0.79□□□□□ -2.54
SNORA40.16-201ENST00000517238 M0R2C6 588 aa-0.79□□□□□ -2.54
SNORA40.16-201ENST00000517238 EYA2O00167 538 aa-0.79□□□□□ -2.54
SNORA40.16-201ENST00000517238 PSMD14O00487 310 aa-0.79□□□□□ -2.54
SNORA40.16-201ENST00000517238 TLR5O60602 858 aa-0.79□□□□□ -2.54
SNORA40.16-201ENST00000517238 PCDH8O95206 1070 aa-0.79□□□□□ -2.54
SNORA40.16-201ENST00000517238 MT-CO3P00414 261 aa-0.79□□□□□ -2.54
SNORA40.16-201ENST00000517238 AFPP02771 609 aaKnown RBP-0.79□□□□□ -2.54
SNORA40.16-201ENST00000517238 LCATP04180 440 aa-0.79□□□□□ -2.54
SNORA40.16-201ENST00000517238 ITGA2BP08514 1039 aa-0.79□□□□□ -2.54
SNORA40.16-201ENST00000517238 XPAP23025 273 aaPredicted RBP-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms