RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 GPBAR1Q8TDU6 330 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 HEXIM2Q96MH2 286 aaKnown RBP6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SEPT5Q99719 369 aaPredicted RBP6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ANP32EQ9BTT0 268 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 MED10Q9BTT4 135 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 INTS2Q9H0H0 1204 aaKnown RBP6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 HSD3B7Q9H2F3 369 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 PLEKHA4Q9H4M7 779 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SOX17Q9H6I2 414 aaPredicted RBP6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 UBE2ZQ9H832 354 aaPredicted RBP6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 MAN1C1Q9NR34 630 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CISHQ9NSE2 258 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TMLHEQ9NVH6 421 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CACNA2D2Q9NY47 1150 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 GCNT4Q9P109 453 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CLEC1BQ9P126 229 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 COG5Q9UP83 839 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 PCDHB4Q9Y5E5 795 aa6.16□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ANK1P16157 1881 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 PLXNA4Q9HCM2 1894 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 A0A1W2PQH9 124 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 GTPBP10A4D1E9 387 aaKnown RBP6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 MTMR11A4FU01 709 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 LINC01387J3KSC0 135 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 GFRA2O00451 464 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CCL16O15467 120 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TBX10O75333 385 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 GJB6O95452 261 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 LRG1P02750 347 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 KRT5P13647 590 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CD19P15391 556 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 HOXB8P17481 243 aaPredicted RBP6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CYP2F1P24903 491 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 GRIK1P39086 918 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 MAP2K3P46734 347 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ALDH1A3P47895 512 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 MFAP3P55082 362 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 UBASH3AP57075 661 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 APBA1Q02410 837 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 C19orf57Q0VDD7 668 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TWF1Q12792 350 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SMARCB1Q12824 385 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 KCNC3Q14003 757 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 INPP5AQ14642 412 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 MAPRE1Q15691 268 aaKnown RBP6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TAF12Q16514 161 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 MDH1BQ5I0G3 518 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 FAM171BQ6P995 826 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 GJB7Q6PEY0 223 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SYCE2Q6PIF2 218 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TRIM65Q6PJ69 517 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TMEM270Q6UE05 265 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TMC5Q6UXY8 1006 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 C4orf50Q6ZRC1 276 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 UNC93AQ86WB7 457 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ARHGEF19Q8IW93 802 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SCN4BQ8IWT1 228 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TCEAL8Q8IYN2 117 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CRYBG2Q8N1P7 616 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TTC39CQ8N584 583 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 C12orf29Q8N999 325 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SLC7A14Q8TBB6 771 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 C2orf15Q8WU43 125 aaKnown RBP6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 HDAC7Q8WUI4 952 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 KAT5Q92993 513 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CYFIP2Q96F07 1278 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TMEM176AQ96HP8 235 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 FAXDC2Q96IV6 333 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TNIP3Q96KP6 325 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 FAM81BQ96LP2 452 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ZNF512Q96ME7 567 aaPredicted RBP6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 NAP1L5Q96NT1 182 aaPredicted RBP6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TWNKQ96RR1 684 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CORO1BQ9BR76 489 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 LSM14BQ9BX40 385 aaKnown RBP6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ADAM7Q9H2U9 754 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 DPEP3Q9H4B8 488 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SFXN1Q9H9B4 322 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CRTAC1Q9NQ79 661 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CD207Q9UJ71 328 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 FBXW11Q9UKB1 542 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 DNAJC12Q9UKB3 198 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 MAFFQ9ULX9 164 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 NME7Q9Y5B8 376 aa6.15□□□□□ -1.42
SCARNA6.1-201ENST00000516989 PDCD11Q14690 1871 aaKnown RBP6.14□□□□□ -1.43
SCARNA6.1-201ENST00000516989 ESYT3A0FGR9 886 aa6.14□□□□□ -1.43
SCARNA6.1-201ENST00000516989 LGALS16A8MUM7 142 aa6.14□□□□□ -1.43
SCARNA6.1-201ENST00000516989 RNF225M0QZC1 329 aaPredicted RBP6.14□□□□□ -1.43
SCARNA6.1-201ENST00000516989 CLDN5O00501 218 aa6.14□□□□□ -1.43
SCARNA6.1-201ENST00000516989 TEX33O43247 280 aa6.14□□□□□ -1.43
SCARNA6.1-201ENST00000516989 EIF4EBP3O60516 100 aaPredicted RBP6.14□□□□□ -1.43
SCARNA6.1-201ENST00000516989 SOAT2O75908 522 aa6.14□□□□□ -1.43
SCARNA6.1-201ENST00000516989 HTR3BO95264 441 aa6.14□□□□□ -1.43
SCARNA6.1-201ENST00000516989 VNN2O95498 520 aa6.14□□□□□ -1.43
SCARNA6.1-201ENST00000516989 ECEL1O95672 775 aa6.14□□□□□ -1.43
SCARNA6.1-201ENST00000516989 HNRNPA1P09651 372 aaKnown RBP eCLIP6.14□□□□□ -1.43
SCARNA6.1-201ENST00000516989 HAPLN1P10915 354 aaPredicted RBP6.14□□□□□ -1.43
SCARNA6.1-201ENST00000516989 PTPN2P17706 415 aa6.14□□□□□ -1.43
SCARNA6.1-201ENST00000516989 BDNFP23560 247 aa6.14□□□□□ -1.43
SCARNA6.1-201ENST00000516989 ANXA13P27216 316 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms