RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 YY1P25490 414 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 CDC25AP30304 524 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 MCM5P33992 734 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 CARSP49589 748 aaKnown RBP3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 JAK3P52333 1124 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 YPEL5P62699 121 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 CFHR1Q03591 330 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 DEUP1Q05D60 604 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SEMA3AQ14563 771 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 KPNB1Q14974 876 aaKnown RBP3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 CLCA4Q14CN2 919 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 PPP2R5AQ15172 486 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SEC23BQ15437 767 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 KIAA0753Q2KHM9 967 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 FAM102BQ5T8I3 360 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 PLAG1Q6DJT9 500 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 KIAA1161Q6NSJ0 714 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SWSAP1Q6NVH7 229 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 USP49Q70CQ1 688 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 EDC3Q96F86 508 aaKnown RBP3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 APIPQ96GX9 242 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 WDYHV1Q96HA8 205 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 LYZL4Q96KX0 146 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 FAM234AQ9H0X4 552 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 COL20A1Q9P218 1284 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 DKK4Q9UBT3 224 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 ZNF212Q9UDV6 495 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 ASAP1Q9ULH1 1129 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 RIMKLBQ9ULI2 386 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 FZD4Q9ULV1 537 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SLC27A6Q9Y2P4 619 aa3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 HEMK1Q9Y5R4 338 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1088P-201ENST00000516850 GOLGA6CA6NDK9 693 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 GOLGA6BA6NDN3 693 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 FAM90A8PA6NJQ4 464 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 TTC34A8MYJ7 566 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 GOLIM4O00461 696 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 CNOT3O75175 753 aaKnown RBP3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 ALPLP05186 524 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 FAM90A13PP0C7W8 464 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 FAM90A24PP0C7X0 464 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 GOLGA6DP0CG33 693 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 RBL1P28749 1068 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 NTSR1P30989 418 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 IL6STP40189 918 aaPredicted RBP3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 LINC00205P59089 165 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 GPC5P78333 572 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 LEXMQ3ZCV2 418 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 MANEAQ5SRI9 462 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 ZNF793Q6ZN11 406 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 UNC13DQ70J99 1090 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SRGAP1Q7Z6B7 1085 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 UEVLDQ8IX04 471 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 METTL25Q8N6Q8 603 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 ZNF548Q8NEK5 533 aaPredicted RBP3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 ADAMTS15Q8TE58 950 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 WASF1Q92558 559 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 THOC3Q96J01 351 aaKnown RBP3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 MARK4Q96L34 752 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 TBC1D23Q9NUY8 699 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 GOLGA6AQ9NYA3 693 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 TCEAL9Q9UHQ7 104 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 HPSEQ9Y251 543 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SPATA31A1Q5TZJ5 1347 aa3.38□□□□□ -1.87
RNU6-1088P-201ENST00000516850 CCDC187A0A096LP49 1063 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 AGPSO00116 658 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 CA12O43570 354 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 ZC3H11AO75152 810 aaKnown RBP eCLIP3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 PLAUP00749 431 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SLC3A2P08195 630 aaKnown RBP3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 TMIGD3P0DMS9 266 aaPredicted RBP3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 T-ENOLP0DO92 83 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 RPL17P18621 184 aaKnown RBP3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 KCNJ4P48050 445 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 DGKQP52824 942 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SLC12A2P55011 1212 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 FAM193AP78312 1265 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SRSF1Q07955 248 aaKnown RBP eCLIP3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 MTX1Q13505 466 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 KCNAB1Q14722 419 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 EARS2Q5JPH6 523 aaKnown RBP3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 FAM57BQ71RH2 274 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 RNF44Q7L0R7 432 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 PIP4P1Q86T03 277 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 TCEAL8Q8IYN2 117 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 MMP21Q8N119 569 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 FAM156AQ8NDB6 213 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 BCAS4Q8TDM0 211 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 PIGKQ92643 395 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 ZDHHC12Q96GR4 267 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SNX22Q96L94 193 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 NLRP4Q96MN2 994 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 SCNM1Q9BWG6 230 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 TMEM45AQ9NWC5 275 aa3.37□□□□□ -1.87
RNU6-1088P-201ENST00000516850 WDR47O94967 919 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 MT-ND5P03915 603 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 S100BP04271 92 aaPredicted RBP3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 PEX2P28328 305 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 GALNSP34059 522 aa3.36□□□□□ -1.87
RNU6-1088P-201ENST00000516850 THBS4P35443 961 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms