RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 RCOR3Q9P2K3 495 aaPredicted RBP3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 MTRRQ9UBK8 725 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 SERTAD1Q9UHV2 236 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 RAD54BQ9Y620 910 aa3.48□□□□□ -1.85
SCARNA13-201ENST00000516672 MYO7BQ6PIF6 2116 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 CPED1A4D0V7 1026 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 HIP1O00291 1037 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 CLDN4O14493 209 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 PRKAB2O43741 272 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 ABLIM3O94929 683 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 FSBPO95073 299 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 MAP3K6O95382 1288 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 CLDN9O95484 217 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 EDN3P14138 238 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 ATF2P15336 505 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 GNAT2P19087 354 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 NFKBIAP25963 317 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 NTSR1P30989 418 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 IFNAR2P48551 515 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 PDE1AP54750 535 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 NLRP11P59045 1033 aaKnown RBP3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 ADORA2A-AS1P86434 159 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 ROR1Q01973 937 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 KDSRQ06136 332 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 ZNF177Q13360 481 aaPredicted RBP3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 SPIDRQ14159 915 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 PGM5Q15124 567 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 CDKN3Q16667 212 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 SLC9C2Q5TAH2 1124 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 PAPD7Q5XG87 772 aaKnown RBP3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 MTFR2Q6P444 385 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 GIMAP6Q6P9H5 292 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 MIB1Q86YT6 1006 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 LCORLQ8N3X6 602 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 OXR1Q8N573 874 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 KBTBD3Q8NAB2 608 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 TTC16Q8NEE8 873 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 OSCP1Q8WVF1 389 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 SEPT1Q8WYJ6 367 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 USP13Q92995 863 aaPredicted RBP3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 KIAA1143Q96AT1 154 aaPredicted RBP3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 SH3KBP1Q96B97 665 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 EVI5LQ96CN4 794 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 HAPLN3Q96S86 360 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 PNKPQ96T60 521 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 PCYT2Q99447 389 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 SENP7Q9BQF6 1050 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 ORAI3Q9BRQ5 295 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 FOXP3Q9BZS1 431 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 TASP1Q9H6P5 420 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 ANTXR1Q9H6X2 564 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 L2HGDHQ9H9P8 463 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 MLXIPLQ9NP71 852 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 ATP8A2Q9NTI2 1148 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 EVA1BQ9NVM1 165 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 PAG1Q9NWQ8 432 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 TLR7Q9NYK1 1049 aaKnown RBP3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 STMN3Q9NZ72 180 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 LRIT1Q9P2V4 623 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 ZNF451Q9Y4E5 1061 aa3.47□□□□□ -1.85
SCARNA13-201ENST00000516672 SEC16AO15027 2179 aa3.46□□□□□ -1.85
SCARNA13-201ENST00000516672 TRGV8A0A0C4DH27 118 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 TCRBV5S4A2TA0A5A2 114 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 MYMKA6NI61 221 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 FOXO6A8MYZ6 492 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 GOLIM4O00461 696 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 RNF113AO15541 343 aaKnown RBP3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 SMARCA5O60264 1052 aaPredicted RBP3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 RAD1O60671 282 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 CTAG2O75638 210 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 FURINP09958 794 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 GIMD1P0DJR0 217 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 NID1P14543 1247 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 DARSP14868 501 aaKnown RBP3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 PDE6AP16499 860 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 GUCY2CP25092 1073 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 GABRR2P28476 465 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 CCND2P30279 289 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 ADD2P35612 726 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 STAT1P42224 750 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 RAB27AP51159 221 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 MFAP1P55081 439 aaKnown RBP3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 ARPP19P56211 112 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 NXPH1P58417 271 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 BFSP1Q12934 665 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 MYBPHQ13203 477 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 MTF1Q14872 753 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 ACOX1Q15067 660 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 GAB4Q2WGN9 574 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 GNPTABQ3T906 1256 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 CRTC2Q53ET0 693 aaPredicted RBP3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 TMEM164Q5U3C3 297 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 PPP1R18Q6NYC8 613 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 GUSBP11Q6P575 273 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 STOX1Q6ZVD7 989 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 TECPR1Q7Z6L1 1165 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 MRPL10Q7Z7H8 261 aaKnown RBP3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 TMEM135Q86UB9 458 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 MCF2L2Q86YR7 1114 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms