RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 EIF2AQ9BY44 585 aaKnown RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 NXF3Q9H4D5 531 aaKnown RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 RPF1Q9H9Y2 349 aaKnown RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 RSAD1Q9HA92 442 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 POLD4Q9HCU8 107 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SLC38A7Q9NVC3 462 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 RBAKQ9NYW8 714 aaPredicted RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 LMCD1Q9NZU5 365 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ANKFY1Q9P2R3 1169 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ARMCX3Q9UH62 379 aaPredicted RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 NDOR1Q9UHB4 597 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ITGA11Q9UKX5 1188 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 UBQLN1Q9UMX0 589 aaKnown RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CTNND2Q9UQB3 1225 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FRMD4BQ9Y2L6 1034 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 COQ4Q9Y3A0 265 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MRPS23Q9Y3D9 190 aaKnown RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 NFE2L3Q9Y4A8 694 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 DAAM1Q9Y4D1 1078 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 INSL6Q9Y581 213 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SLC4A7Q9Y6M7 1214 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TET1Q8NFU7 2136 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MYH11P35749 1972 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CDH23Q9H251 3354 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PDE4DIPQ5VU43 2346 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 LAMA2P24043 3122 aaKnown RBP2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TRBV23OR9-2A0A075B6M9 112 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SMIM28A0A1B0GU29 152 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ANO9A1A5B4 782 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FSD2A1L4K1 749 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 LINC01553A4QN01 128 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ARL5CA6NH57 179 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 LRRIQ3A6PVS8 624 aaPredicted RBP2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 LGALS16A8MUM7 142 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 BECN2A8MW95 431 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 LACTBL1A8MY62 500 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TISP43B9A030 160 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ANKRD63C9JTQ0 380 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 H0YGN5 161 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 GOLGA6L19H0YKK7 550 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PODXLO00592 558 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SYN3O14994 580 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CLIC2O15247 247 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 OPA1O60313 960 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 NPHS1O60500 1241 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ADAM23O75077 832 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ZNF205O95201 554 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 AFPP02771 609 aaKnown RBP2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 C4BPAP04003 597 aaKnown RBP2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 RB1P06400 928 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TMEM191BP0C7N4 346 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 HARSP12081 509 aaKnown RBP2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 KRT13P13646 458 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 RAC2P15153 192 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ATICP31939 592 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 RPL9P32969 192 aaKnown RBP2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MLH1P40692 756 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TNFSF9P41273 254 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MATR3P43243 847 aaKnown RBP eCLIP2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CASP4P49662 377 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MXI1P50539 228 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SCNN1GP51170 649 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 VAMP7P51809 220 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 GFRA1P56159 465 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ERVK-21P61565 698 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 GUCY1A3Q02108 690 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 GCNT1Q02742 428 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TEKQ02763 1124 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 UBE3AQ05086 875 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CETN1Q12798 172 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ELAVL2Q12926 359 aaKnown RBP2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TMEM132DQ14C87 1099 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SHHQ15465 462 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MAN2A1Q16706 1144 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 UPP1Q16831 310 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 GAB4Q2WGN9 574 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CCDC40Q4G0X9 1142 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ANO6Q4KMQ2 910 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 EPC2Q52LR7 807 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FIGNQ5HY92 759 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 RALGPS1Q5JS13 557 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CLLU1OSQ5K130 101 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ZBTB41Q5SVQ8 909 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 C9orf50Q5SZB4 431 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 C1orf220Q5T0J3 134 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 RNF187Q5TA31 235 aaPredicted RBP2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 KRT39Q6A163 491 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FAM109BQ6ICB4 259 aaPredicted RBP2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 JADE1Q6IE81 842 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PDXDC1Q6P996 788 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SARM1Q6SZW1 724 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 KCNT2Q6UVM3 1135 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CEP128Q6ZU80 1094 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 OTOP2Q7RTS6 562 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 APTXQ7Z2E3 356 aaKnown RBP2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TRAPPC11Q7Z392 1133 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 LIMS2Q7Z4I7 341 aa2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MTDHQ86UE4 582 aaKnown RBP2.35□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CDR2LQ86X02 465 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms