RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 SSX2IPQ9Y2D8 614 aa-0.36□□□□□ -2.47
RNU6-542P-201ENST00000516405 PCDHGB7Q9Y5F8 929 aa-0.36□□□□□ -2.47
RNU6-542P-201ENST00000516405 USP24Q9UPU5 2620 aa-0.36□□□□□ -2.47
RNU6-542P-201ENST00000516405 LOC101059915A0A1B0GWI6 518 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 LCHNA4D1U4 455 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 HMX3A6NHT5 357 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 H7C1D1 291 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 POLRMTO00411 1230 aaKnown RBP-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 ERC2O15083 957 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 TEX33O43247 280 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 LATO43561 262 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 AFPP02771 609 aaKnown RBP-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 AMY1AP04745 511 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 DLDP09622 509 aaKnown RBP-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 CHRM3P20309 590 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 LIMK2P53671 638 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 GYS2P54840 703 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 RACK1P63244 317 aaKnown RBP-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 ATP8B2P98198 1209 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 ARHGAP44Q17R89 818 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 TDRD12Q587J7 1177 aaKnown RBP-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 ICE2Q659A1 982 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 CREB3L3Q68CJ9 461 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 ZNF776Q68DI1 518 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 FAAP20Q6NZ36 180 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 DPY19L3Q6ZPD9 716 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 DCDC5Q6ZRR9 648 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 RTN4RL2Q86UN3 420 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 HPS6Q86YV9 775 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 ZGPATQ8N5A5 531 aaKnown RBP-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 GPR156Q8NFN8 814 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 OR14C36Q8NHC7 312 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 ATG4AQ8WYN0 398 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 MOCOSQ96EN8 888 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 PRR25Q96S07 402 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 ASCL2Q99929 193 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 OPRPNQ99935 248 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 RTN4RQ9BZR6 473 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 GLOD4Q9HC38 313 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 AGO4Q9HCK5 861 aaKnown RBP-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 TCF7L1Q9HCS4 588 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 GAR1Q9NY12 217 aaKnown RBP-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 GPR83Q9NYM4 423 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 LPAR3Q9UBY5 353 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 SERTAD3Q9UJW9 196 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 ZDHHC8Q9ULC8 765 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 ZNF256Q9Y2P7 627 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 CDY2AQ9Y6F7 541 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 HCFC1P51610 2035 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 SORL1Q92673 2214 aa-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 ZNF469Q96JG9 3925 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-542P-201ENST00000516405 PRRC2BQ5JSZ5 2229 aaKnown RBP-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 IGLV5-52A0A0A0MRZ9 124 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 PMS2P5A8MQ11 134 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 RSPH10B2B2RC85 870 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 I6L893 689 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 CBX4O00257 560 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 MDM4O15151 490 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 PRPF4O43172 522 aaKnown RBP eCLIP-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 CYP1A2P05177 515 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 TUBBP07437 444 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 HOXC4P09017 264 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 RSPH10BP0C881 870 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 ITGALP20701 1170 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 UBA1P22314 1058 aaKnown RBP-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 SLC6A9P48067 706 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 CLCN3P51790 818 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 PMS2P54278 862 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 PER3P56645 1201 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 GNB1P62873 340 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 TUBB4BP68371 445 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 NDPQ00604 133 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 SNTA1Q13424 505 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 KCNB1Q14721 858 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 ZNF174Q15697 407 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 FAM110CQ1W6H9 321 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 DALRD3Q5D0E6 543 aaKnown RBP-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 PARM1Q6UWI2 310 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 FJX1Q86VR8 437 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 GPSM1Q86YR5 675 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 C16orf71Q8IYS4 520 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 ANKRD44Q8N8A2 993 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 NEXN-AS1Q8NBZ9 246 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 NFAM1Q8NET5 270 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 THAP4Q8WY91 577 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 SCLYQ96I15 445 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 C18orf12Q96KH6 178 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 C17orf77Q96MU5 243 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 ZIM3Q96PE6 472 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 IWS1Q96ST2 819 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 CDX2Q99626 313 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 NUAK2Q9H093 628 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 MAP6D1Q9H9H5 199 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 MOV10Q9HCE1 1003 aaKnown RBP-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 FBRSL1Q9HCM7 1045 aaKnown RBP-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 TMEM140Q9NV12 185 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 MALT1Q9UDY8 824 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 RARRES3Q9UL19 164 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 MAFFQ9ULX9 164 aa-0.38□□□□□ -2.47
RNU6-542P-201ENST00000516405 PPP2R3BQ9Y5P8 575 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms