RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 FAM90A8PA6NJQ4 464 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 INPPL1O15357 1258 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 ALPLP05186 524 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 FAM90A13PP0C7W8 464 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 FAM90A24PP0C7X0 464 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 IL1R1P14778 569 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 BTF3P20290 206 aaKnown RBP3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 RBL1P28749 1068 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 THBS3P49746 956 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 CCDC15Q0P6D6 951 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 MTX1Q13505 466 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 POLD3Q15054 466 aaPredicted RBP3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 ARHGAP29Q52LW3 1261 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 FAM102BQ5T8I3 360 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 PLAG1Q6DJT9 500 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 CLEC9AQ6UXN8 241 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 COLCA1Q6ZS62 124 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 USP49Q70CQ1 688 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 SKAP1Q86WV1 359 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 MMP21Q8N119 569 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 SDR16C5Q8N3Y7 309 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 ZNF548Q8NEK5 533 aaPredicted RBP3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 BCAS4Q8TDM0 211 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 ADAMTS15Q8TE58 950 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 LRTOMTQ8WZ04 291 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 APIPQ96GX9 242 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 CHST8Q9H2A9 424 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 COL20A1Q9P218 1284 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 ITGB1BP2Q9UKP3 347 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 ASAP1Q9ULH1 1129 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 CAPN11Q9UMQ6 739 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 SLC27A6Q9Y2P4 619 aa3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.51□□□□□ -1.85
RNU4-49P-201ENST00000516080 B4DGG1 531 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 GOLIM4O00461 696 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 MGEA5O60502 916 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 MAP4K4O95819 1239 aaPredicted RBP3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 TOMM40O96008 361 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 HRGP04196 525 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 TMEM225BP0DP42 221 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 MYF5P13349 255 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 JAK3P52333 1124 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 COPAP53621 1224 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 B4GALNT1Q00973 533 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 EARS2Q5JPH6 523 aaKnown RBP3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 RNF220Q5VTB9 566 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 NXNQ6DKJ4 435 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 DARS2Q6PI48 645 aaKnown RBP3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 UNC13DQ70J99 1090 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 MEPCEQ7L2J0 689 aaKnown RBP3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 SRGAP1Q7Z6B7 1085 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 MSLNLQ96KJ4 702 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 NUAK2Q9H093 628 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 FAM234AQ9H0X4 552 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 ARL8BQ9NVJ2 186 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 SEMA5BQ9P283 1151 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 VPS51Q9UID3 782 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 NOB1Q9ULX3 412 aaKnown RBP3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 COL15A1P39059 1388 aa3.5□□□□□ -1.85
RNU4-49P-201ENST00000516080 CCDC187A0A096LP49 1063 aa3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 PRAMEF2O60811 474 aa3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 PLAUP00749 431 aa3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 TMIGD3P0DMS9 266 aaPredicted RBP3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 RPL17P18621 184 aaKnown RBP3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 NTSR1P30989 418 aa3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 CARSP49589 748 aaKnown RBP3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 SEMA3AQ14563 771 aa3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 KCNAB1Q14722 419 aa3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 KPNB1Q14974 876 aaKnown RBP3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 ODR4Q5SWX8 454 aa3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 MANEALQ5VSG8 457 aa3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 DAB2IPQ5VWQ8 1189 aa3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 ZNF793Q6ZN11 406 aa3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 P3H2Q8IVL5 708 aa3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 FSTL5Q8N475 847 aaPredicted RBP3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 MBD3L2Q8NHZ7 208 aaPredicted RBP3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 TMEM45AQ9NWC5 275 aa3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 ZNF212Q9UDV6 495 aa3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 HPSEQ9Y251 543 aa3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 THRAP3Q9Y2W1 955 aaKnown RBP3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 LRP12Q9Y561 859 aa3.49□□□□□ -1.85
RNU4-49P-201ENST00000516080 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.48□□□□□ -1.85
RNU4-49P-201ENST00000516080 IGLV5-39A0A0G2JS06 123 aa3.48□□□□□ -1.85
RNU4-49P-201ENST00000516080 C2CD4BA6NLJ0 364 aa3.48□□□□□ -1.85
RNU4-49P-201ENST00000516080 CA12O43570 354 aa3.48□□□□□ -1.85
RNU4-49P-201ENST00000516080 GALNSP34059 522 aa3.48□□□□□ -1.85
RNU4-49P-201ENST00000516080 IL6STP40189 918 aaPredicted RBP3.48□□□□□ -1.85
RNU4-49P-201ENST00000516080 HTR6P50406 440 aa3.48□□□□□ -1.85
RNU4-49P-201ENST00000516080 DGKQP52824 942 aa3.48□□□□□ -1.85
RNU4-49P-201ENST00000516080 SLC12A2P55011 1212 aa3.48□□□□□ -1.85
RNU4-49P-201ENST00000516080 NANOS2P60321 138 aaKnown RBP3.48□□□□□ -1.85
RNU4-49P-201ENST00000516080 WDR5P61964 334 aaKnown RBP3.48□□□□□ -1.85
RNU4-49P-201ENST00000516080 FAM193AP78312 1265 aa3.48□□□□□ -1.85
RNU4-49P-201ENST00000516080 DNASE1L3Q13609 305 aa3.48□□□□□ -1.85
RNU4-49P-201ENST00000516080 ERV3-1Q14264 604 aa3.48□□□□□ -1.85
RNU4-49P-201ENST00000516080 PPP2R5AQ15172 486 aa3.48□□□□□ -1.85
RNU4-49P-201ENST00000516080 KIAA0753Q2KHM9 967 aa3.48□□□□□ -1.85
RNU4-49P-201ENST00000516080 MANEAQ5SRI9 462 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms