RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 CLSTN3Q9BQT9 956 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 ERP44Q9BS26 406 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 NEUROG2Q9H2A3 272 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 NMUR1Q9HB89 426 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 PCDH18Q9HCL0 1135 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 ANLNQ9NQW6 1124 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 OSER1Q9NX31 292 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 MTMR10Q9NXD2 777 aa9.54□□□□□ -0.88
CPNE4-213ENST00000515418 UTP11Q9Y3A2 253 aaKnown RBP9.54□□□□□ -0.88
CPNE4-213ENST00000515418 CHD9Q3L8U1 2897 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 WDR27A2RRH5 827 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 BHMG1C9JSJ3 638 aaPredicted RBP9.53□□□□□ -0.88
CPNE4-213ENST00000515418 H7C4K7 107 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 I6L893 689 aaPredicted RBP9.53□□□□□ -0.88
CPNE4-213ENST00000515418 LIASO43766 372 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 ERLIN1O75477 346 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 CAPN15O75808 1086 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 PECAM1P16284 738 aaPredicted RBP9.53□□□□□ -0.88
CPNE4-213ENST00000515418 DESP17661 470 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 MCM3P25205 808 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 DNAJB2P25686 324 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 YWHAGP61981 247 aaKnown RBP eCLIP9.53□□□□□ -0.88
CPNE4-213ENST00000515418 FPGSQ05932 587 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 DEUP1Q05D60 604 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 DHX34Q14147 1143 aaKnown RBP9.53□□□□□ -0.88
CPNE4-213ENST00000515418 HLTFQ14527 1009 aaKnown RBP eCLIP9.53□□□□□ -0.88
CPNE4-213ENST00000515418 PSMD5Q16401 504 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 PPP2R5EQ16537 467 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 TMEM240Q5SV17 173 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 DUPD1Q68J44 220 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 C1orf228Q6PIY5 440 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 VSTM1Q6UX27 236 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 STRADAQ7RTN6 431 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 BNIPLQ7Z465 357 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 NUP93Q8N1F7 819 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 SLC39A11Q8N1S5 342 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 CCDC33Q8N5R6 958 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 GLIS1Q8NBF1 620 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 ATL2Q8NHH9 583 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 PCDH19Q8TAB3 1148 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 GIPC2Q8TF65 315 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 AENQ8WTP8 325 aaKnown RBP9.53□□□□□ -0.88
CPNE4-213ENST00000515418 TEKT4Q8WW24 435 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 FUBP3Q96I24 572 aaKnown RBP eCLIP9.53□□□□□ -0.88
CPNE4-213ENST00000515418 ZBED2Q9BTP6 218 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 MAK16Q9BXY0 300 aaKnown RBP9.53□□□□□ -0.88
CPNE4-213ENST00000515418 FUT8Q9BYC5 575 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 PNPLA8Q9NP80 782 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 DDIT4Q9NX09 232 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.53□□□□□ -0.88
CPNE4-213ENST00000515418 SFMBT1Q9UHJ3 866 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 AP4E1Q9UPM8 1137 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 NUP205Q92621 2012 aa9.53□□□□□ -0.88
CPNE4-213ENST00000515418 GREB1Q4ZG55 1949 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 A0A1W2PQH9 124 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 EFCAB14O75071 495 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 MAP3K6O95382 1288 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 ECEL1O95672 775 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 ETS1P14921 441 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 ECHS1P30084 290 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 PTPN7P35236 360 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 RDXP35241 583 aaKnown RBP9.52□□□□□ -0.89
CPNE4-213ENST00000515418 RPL21P46778 160 aaKnown RBP9.52□□□□□ -0.89
CPNE4-213ENST00000515418 FNTAP49354 379 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 VPS41P49754 854 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 OTUD4Q01804 1114 aaKnown RBP9.52□□□□□ -0.89
CPNE4-213ENST00000515418 ROR1Q01973 937 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 BYSLQ13895 437 aaKnown RBP9.52□□□□□ -0.89
CPNE4-213ENST00000515418 PPP1R7Q15435 360 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 ANKRD20A8PQ5CZ79 823 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 BBS12Q6ZW61 710 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 RNF168Q8IYW5 571 aaPredicted RBP9.52□□□□□ -0.89
CPNE4-213ENST00000515418 PQLC3Q8N755 202 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 NETO2Q8NC67 525 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 ACTL9Q8TC94 416 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 IRGQQ8WZA9 623 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 TMEM169Q96HH4 297 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 C8orf48Q96LL4 319 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 RNF157Q96PX1 679 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 KCTD15Q96SI1 283 aaPredicted RBP9.52□□□□□ -0.89
CPNE4-213ENST00000515418 TMEM121Q9BTD3 319 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 WDR6Q9NNW5 1121 aaKnown RBP9.52□□□□□ -0.89
CPNE4-213ENST00000515418 PRDM10Q9NQV6 1147 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.52□□□□□ -0.89
CPNE4-213ENST00000515418 SPG21Q9NZD8 308 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 ZMYND8Q9ULU4 1186 aaPredicted RBP9.52□□□□□ -0.89
CPNE4-213ENST00000515418 FZD10Q9ULW2 581 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 STAP1Q9ULZ2 295 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 ZNF148Q9UQR1 794 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 SNX10Q9Y5X0 201 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 PATJQ8NI35 1801 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 MYO16Q9Y6X6 1858 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 FAM187AA6NFU0 413 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 FAM72CH0Y354 149 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 TRIM66O15016 1216 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 MDM4O15151 490 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 BAIAP3O94812 1187 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 CSPG5O95196 566 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 GJB5O95377 273 aa9.52□□□□□ -0.89
CPNE4-213ENST00000515418 SEC24AO95486 1093 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms