RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 ZNF862O60290 1169 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 MYCLP12524 364 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 ZNF16P17020 682 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 RGS2P41220 211 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 SLC1A1P43005 524 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 KRT76Q01546 638 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 DSG2Q14126 1118 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 KPNB1Q14974 876 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 SMU1Q2TAY7 513 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 SGO2Q562F6 1265 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 EGFLAMQ63HQ2 1017 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 METTL2BQ6P1Q9 378 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 USP43Q70EL4 1123 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 CEP68Q76N32 757 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 MARK2Q7KZI7 788 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 TRMT1LQ7Z2T5 733 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 CBWD2Q8IUF1 395 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 MAP4K3Q8IVH8 894 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 NUP93Q8N1F7 819 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 BBS5Q8N3I7 341 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 LZTR1Q8N653 840 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 EIF1ADQ8N9N8 165 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 PRPF31Q8WWY3 499 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 FBXL18Q96ME1 805 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 PCDHB18PQ96TA0 734 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 MRPL1Q9BYD6 325 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 SMARCAD1Q9H4L7 1026 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 TAF1DQ9H5J8 278 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 UBE2TQ9NPD8 197 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 TRNAU1APQ9NX07 287 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 PIM2Q9P1W9 311 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 SOX13Q9UN79 622 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 ADAMTS5Q9UNA0 930 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 FZD1Q9UP38 647 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 TYW5A2RUC4 315 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 FUOMA2VDF0 154 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 C5orf60A6NFR6 353 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 WDR64B1ANS9 1081 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 BTBD19C9JJ37 291 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 TRAPPC3O43617 180 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 HSPA9P38646 679 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 NPTX2P47972 431 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 JAK3P52333 1124 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 SOX10P56693 466 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 SF3A3Q12874 501 aaKnown RBP eCLIP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 CUL1Q13616 776 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 TNFAIP1Q13829 316 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 SPCS2Q15005 226 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 SF3B4Q15427 424 aaKnown RBP eCLIP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 UAP1Q16222 522 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 FAM26DQ5JW98 314 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 RTL10Q7L3V2 364 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 TRPM8Q7Z2W7 1104 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 VSIG10LQ86VR7 867 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 CD302Q8IX05 232 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 SLC17A8Q8NDX2 589 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 EPS8L1Q8TE68 723 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 UPF1Q92900 1129 aaKnown RBP eCLIP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 NRBF2Q96F24 287 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 DDX23Q9BUQ8 820 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 ERVK-5Q9HDB9 667 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 ACP6Q9NPH0 428 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 PDLIM7Q9NR12 457 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 ANKEF1Q9NU02 776 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 ZNF112Q9UJU3 913 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 ZNF214Q9UL59 606 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 TBX20Q9UMR3 447 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 MAGED1Q9Y5V3 778 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 CCDC188H7C350 402 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 KRT13P13646 458 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 SFNP31947 248 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 NCALDP61601 193 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 SNRPFP62306 86 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 MRPS15P82914 257 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 NFX1Q12986 1120 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 BAATQ14032 418 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 SNRNP35Q16560 246 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 Q3C1V9 767 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 CCDC58Q4VC31 144 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 SPOPLQ6IQ16 392 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 ITIH5Q86UX2 942 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 MICALL2Q8IY33 904 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 ZBED8Q8IZ13 594 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 ST13P4Q8IZP2 240 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 PJA1Q8NG27 643 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 ASAP3Q8TDY4 903 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 ADAMTS19Q8TE59 1207 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 JDP2Q8WYK2 163 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 ALG3Q92685 438 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 RBM18Q96H35 190 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 COX4I2Q96KJ9 171 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 TRIM31Q9BZY9 425 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 MARCH7Q9H992 704 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 SIAEQ9HAT2 523 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 RNF146Q9NTX7 359 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 KLHL3Q9UH77 587 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 AMACRQ9UHK6 382 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 AMFRQ9UKV5 643 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 RNF112Q9ULX5 631 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 COQ4Q9Y3A0 265 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms