RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 EGFLAMQ63HQ2 1017 aa14.01□□□□□ -0.17
PFDN1-206ENST00000514611 RNF43Q68DV7 783 aa14.01□□□□□ -0.17
PFDN1-206ENST00000514611 GRAMD4Q6IC98 578 aa14.01□□□□□ -0.17
PFDN1-206ENST00000514611 KLHDC10Q6PID8 442 aa14.01□□□□□ -0.17
PFDN1-206ENST00000514611 Q6ZNB5 142 aa14.01□□□□□ -0.17
PFDN1-206ENST00000514611 ARMCX6Q7L4S7 300 aa14.01□□□□□ -0.17
PFDN1-206ENST00000514611 CYP2U1Q7Z449 544 aa14.01□□□□□ -0.17
PFDN1-206ENST00000514611 C11orf74Q86VG3 221 aa14.01□□□□□ -0.17
PFDN1-206ENST00000514611 ZC3H3Q8IXZ2 948 aaKnown RBP14.01□□□□□ -0.17
PFDN1-206ENST00000514611 ERLEC1Q96DZ1 483 aa14.01□□□□□ -0.17
PFDN1-206ENST00000514611 CCDC34Q96HJ3 373 aa14.01□□□□□ -0.17
PFDN1-206ENST00000514611 TMEM176AQ96HP8 235 aa14.01□□□□□ -0.17
PFDN1-206ENST00000514611 RMND1Q9NWS8 449 aa14.01□□□□□ -0.17
PFDN1-206ENST00000514611 MBD1Q9UIS9 605 aaPredicted RBP14.01□□□□□ -0.17
PFDN1-206ENST00000514611 RASAL2Q9UJF2 1139 aa14.01□□□□□ -0.17
PFDN1-206ENST00000514611 DNMT3LQ9UJW3 386 aa14.01□□□□□ -0.17
PFDN1-206ENST00000514611 ZFHX4Q86UP3 3567 aa14.01□□□□□ -0.17
PFDN1-206ENST00000514611 ATXN2Q99700 1313 aaKnown RBP14□□□□□ -0.17
PFDN1-206ENST00000514611 STC2O76061 302 aa14□□□□□ -0.17
PFDN1-206ENST00000514611 HOXB2P14652 356 aa14□□□□□ -0.17
PFDN1-206ENST00000514611 MAP7D1Q3KQU3 841 aa14□□□□□ -0.17
PFDN1-206ENST00000514611 ANKRD40Q6AI12 368 aa14□□□□□ -0.17
PFDN1-206ENST00000514611 PIGZQ86VD9 579 aa14□□□□□ -0.17
PFDN1-206ENST00000514611 PGBD3Q8N328 593 aa14□□□□□ -0.17
PFDN1-206ENST00000514611 ENGASEQ8NFI3 743 aa14□□□□□ -0.17
PFDN1-206ENST00000514611 SPACA7Q96KW9 195 aa14□□□□□ -0.17
PFDN1-206ENST00000514611 XPO6Q96QU8 1125 aaKnown RBP14□□□□□ -0.17
PFDN1-206ENST00000514611 ACOX2Q99424 681 aa14□□□□□ -0.17
PFDN1-206ENST00000514611 TSG101Q99816 390 aa14□□□□□ -0.17
PFDN1-206ENST00000514611 PLK2Q9NYY3 685 aa14□□□□□ -0.17
PFDN1-206ENST00000514611 MARK1Q9P0L2 795 aa14□□□□□ -0.17
PFDN1-206ENST00000514611 MYOFQ9NZM1 2061 aa14□□□□□ -0.17
PFDN1-206ENST00000514611 RALGAPA1Q6GYQ0 2036 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 PRRT4C9JH25 899 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 TULP2O00295 520 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 SLC16A3O15427 465 aaKnown RBP13.99□□□□□ -0.17
PFDN1-206ENST00000514611 STX10O60499 249 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 KLKB1P03952 638 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 HMBSP08397 361 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 RALAP11233 206 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 GABRG2P18507 467 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 PTGER3P43115 390 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 PLA2G4AP47712 749 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 PSEN1P49768 467 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 EFEMP1Q12805 493 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 GOLGA7BQ2TAP0 167 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 PREPLQ4J6C6 727 aaPredicted RBP13.99□□□□□ -0.17
PFDN1-206ENST00000514611 COBLL1Q53SF7 1204 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 ARHGAP17Q68EM7 881 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 TRMT11Q7Z4G4 463 aaKnown RBP13.99□□□□□ -0.17
PFDN1-206ENST00000514611 TMEFF1Q8IYR6 380 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 SPATA20Q8TB22 786 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 DDX1Q92499 740 aaKnown RBP13.99□□□□□ -0.17
PFDN1-206ENST00000514611 PIGKQ92643 395 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 SMARCE1Q969G3 411 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 FAXDC2Q96IV6 333 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 GSDMAQ96QA5 445 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 DNAI2Q9GZS0 605 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 CLIC5Q9NZA1 410 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 CALCOCO1Q9P1Z2 691 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 TSPAN16Q9UKR8 245 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 STARD13Q9Y3M8 1113 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 RAD54BQ9Y620 910 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 SPAG17Q6Q759 2223 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 SDK1Q7Z5N4 2213 aa13.99□□□□□ -0.17
PFDN1-206ENST00000514611 A0A1W2PQF6 199 aa13.98□□□□□ -0.17
PFDN1-206ENST00000514611 GOLGA6L4A6NEF3 574 aa13.98□□□□□ -0.17
PFDN1-206ENST00000514611 NTSR1P30989 418 aa13.98□□□□□ -0.17
PFDN1-206ENST00000514611 CORO1AP31146 461 aaKnown RBP13.98□□□□□ -0.17
PFDN1-206ENST00000514611 DGKGP49619 791 aa13.98□□□□□ -0.17
PFDN1-206ENST00000514611 FKBP3Q00688 224 aaKnown RBP13.98□□□□□ -0.17
PFDN1-206ENST00000514611 CUL2Q13617 745 aa13.98□□□□□ -0.17
PFDN1-206ENST00000514611 RAB41Q5JT25 222 aa13.98□□□□□ -0.17
PFDN1-206ENST00000514611 ISM2Q6H9L7 571 aa13.98□□□□□ -0.17
PFDN1-206ENST00000514611 KIAA1211LQ6NV74 962 aa13.98□□□□□ -0.17
PFDN1-206ENST00000514611 LPCAT2Q7L5N7 544 aa13.98□□□□□ -0.17
PFDN1-206ENST00000514611 BHLHA9Q7RTU4 235 aa13.98□□□□□ -0.17
PFDN1-206ENST00000514611 TADA2BQ86TJ2 420 aa13.98□□□□□ -0.17
PFDN1-206ENST00000514611 CHPFQ8IZ52 775 aa13.98□□□□□ -0.17
PFDN1-206ENST00000514611 TTC39CQ8N584 583 aa13.98□□□□□ -0.17
PFDN1-206ENST00000514611 KCNV2Q8TDN2 545 aa13.98□□□□□ -0.17
PFDN1-206ENST00000514611 NDRG1Q92597 394 aaKnown RBP13.98□□□□□ -0.17
PFDN1-206ENST00000514611 SLC35C1Q96A29 364 aa13.98□□□□□ -0.17
PFDN1-206ENST00000514611 CD248Q9HCU0 757 aa13.98□□□□□ -0.17
PFDN1-206ENST00000514611 CD93Q9NPY3 652 aa13.98□□□□□ -0.17
PFDN1-206ENST00000514611 CACNA2D2Q9NY47 1150 aa13.98□□□□□ -0.17
PFDN1-206ENST00000514611 WDR35Q9P2L0 1181 aa13.98□□□□□ -0.17
PFDN1-206ENST00000514611 COQ4Q9Y3A0 265 aa13.98□□□□□ -0.17
PFDN1-206ENST00000514611 MYH10P35580 1976 aa13.97□□□□□ -0.17
PFDN1-206ENST00000514611 C4orf47A7E2U8 309 aa13.97□□□□□ -0.17
PFDN1-206ENST00000514611 KHNYNO15037 678 aaKnown RBP13.97□□□□□ -0.17
PFDN1-206ENST00000514611 SMC2O95347 1197 aa13.97□□□□□ -0.17
PFDN1-206ENST00000514611 CISD3P0C7P0 127 aa13.97□□□□□ -0.17
PFDN1-206ENST00000514611 NDUFV2P19404 249 aa13.97□□□□□ -0.17
PFDN1-206ENST00000514611 TKTL1P51854 596 aa13.97□□□□□ -0.17
PFDN1-206ENST00000514611 YWHAGP61981 247 aaKnown RBP eCLIP13.97□□□□□ -0.17
PFDN1-206ENST00000514611 LRRC63Q05C16 580 aa13.97□□□□□ -0.17
PFDN1-206ENST00000514611 PDE4CQ08493 712 aa13.97□□□□□ -0.17
PFDN1-206ENST00000514611 LRMPQ12912 555 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms