RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 ATXN10Q9UBB4 475 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 HAO1Q9UJM8 370 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 VPS28Q9UK41 221 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 PADI4Q9UM07 663 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 SMG5Q9UPR3 1016 aaKnown RBP7.72□□□□□ -1.17
CLIP1-205ENST00000514271 RWDD3Q9Y3V2 267 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 STYXL1Q9Y6J8 313 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 GOLGB1Q14789 3259 aaKnown RBP7.72□□□□□ -1.17
CLIP1-205ENST00000514271 CETN3O15182 167 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 LIASO43766 372 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 CALUO43852 315 aaPredicted RBP7.72□□□□□ -1.17
CLIP1-205ENST00000514271 FAM189A1O60320 539 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 IQCF3P0C7M6 154 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 CKBP12277 381 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 ARL2P36404 184 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 MRPS5P82675 430 aaKnown RBP7.72□□□□□ -1.17
CLIP1-205ENST00000514271 PRPF4BQ13523 1007 aaKnown RBP7.72□□□□□ -1.17
CLIP1-205ENST00000514271 PPP1R21Q6ZMI0 780 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 MAVSQ7Z434 540 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 ARHGAP22Q7Z5H3 698 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 TREML1Q86YW5 311 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 SCG3Q8WXD2 468 aaKnown RBP7.72□□□□□ -1.17
CLIP1-205ENST00000514271 TAF4BQ92750 862 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 ISL2Q96A47 359 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 PRMT7Q9NVM4 692 aaPredicted RBP7.72□□□□□ -1.17
CLIP1-205ENST00000514271 SENP1Q9P0U3 644 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 ZNF232Q9UNY5 417 aa7.72□□□□□ -1.17
CLIP1-205ENST00000514271 MAGEA13PA6NCF6 341 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 ZBTB42B2RXF5 422 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 TM9SF1O15321 606 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 PQBP1O60828 265 aaKnown RBP7.71□□□□□ -1.17
CLIP1-205ENST00000514271 PYGLP06737 847 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 TARSP26639 723 aaKnown RBP7.71□□□□□ -1.17
CLIP1-205ENST00000514271 MARK3P27448 753 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 SLC1A1P43005 524 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 RNASE9P60153 205 aaKnown RBP7.71□□□□□ -1.17
CLIP1-205ENST00000514271 CDK16Q00536 496 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 KRT17Q04695 432 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 STRN3Q13033 797 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 NAA25Q14CX7 972 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 TAF11Q15544 211 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 SKIDA1Q1XH10 827 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 MARCH8Q5T0T0 291 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 STXBP5Q5T5C0 1151 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 ARMC3Q5W041 872 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 ANO5Q75V66 913 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 LONP2Q86WA8 852 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 GPBP1Q86WP2 473 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 ZSWIM2Q8NEG5 633 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 RAB3IL1Q8TBN0 382 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 DUS3LQ96G46 650 aaKnown RBP7.71□□□□□ -1.17
CLIP1-205ENST00000514271 C7orf26Q96N11 449 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 DOK1Q99704 481 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 USP29Q9HBJ7 922 aa7.71□□□□□ -1.17
CLIP1-205ENST00000514271 LARSQ9P2J5 1176 aaKnown RBP7.71□□□□□ -1.17
CLIP1-205ENST00000514271 DNALI1O14645 258 aaPredicted RBP7.71□□□□□ -1.18
CLIP1-205ENST00000514271 PSTPIP1O43586 416 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 DCTN3O75935 186 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 TFAP2AP05549 437 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 STAG3L1P0CL83 205 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 MAGEA12P43365 314 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 SARNPP82979 210 aaKnown RBP7.71□□□□□ -1.18
CLIP1-205ENST00000514271 TAF1BQ53T94 588 aaPredicted RBP7.71□□□□□ -1.18
CLIP1-205ENST00000514271 SNX30Q5VWJ9 437 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 EFCAB12Q6NXP0 572 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 AAGABQ6PD74 315 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 PADI6Q6TGC4 694 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 FAM172AQ8WUF8 416 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 PWWP2AQ96N64 755 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 ZNF184Q99676 751 aaPredicted RBP7.71□□□□□ -1.18
CLIP1-205ENST00000514271 C20orf27Q9GZN8 174 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 ZNF696Q9H7X3 374 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 ETNK1Q9HBU6 452 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 GGT7Q9UJ14 662 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 SDR42E2A6NKP2 422 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 TM7SF2O76062 418 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 FBXO21O94952 628 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 CBX6O95503 412 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 IDO1P14902 403 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 AMPD1P23109 780 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 ATICP31939 592 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 GBP2P32456 591 aaPredicted RBP7.71□□□□□ -1.18
CLIP1-205ENST00000514271 CDR2Q01850 454 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 CCNIQ14094 377 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 KPNB1Q14974 876 aaKnown RBP7.71□□□□□ -1.18
CLIP1-205ENST00000514271 LRRC14Q15048 493 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 RAB30Q15771 203 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 DBN1Q16643 649 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 LIN52Q52LA3 116 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 TDRD12Q587J7 1177 aaKnown RBP7.71□□□□□ -1.18
CLIP1-205ENST00000514271 ARHGEF18Q6ZSZ5 1173 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 RIN3Q8TB24 985 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 ERP27Q96DN0 273 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 GDF15Q99988 308 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 NTPCRQ9BSD7 190 aaKnown RBP7.71□□□□□ -1.18
CLIP1-205ENST00000514271 SETD4Q9NVD3 440 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 RABL2BQ9UNT1 228 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 EXOC7Q9UPT5 735 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 EFR3BQ9Y2G0 817 aa7.71□□□□□ -1.18
CLIP1-205ENST00000514271 MICAL3Q7RTP6 2002 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms