RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 FZD10Q9ULW2 581 aa15.55■□□□□ 0.08
VCAN-211ENST00000513984 TRIM17Q9Y577 477 aa15.55■□□□□ 0.08
VCAN-211ENST00000513984 A6NNZ2 444 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 F8W810 466 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 DDHD2O94830 711 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 FYNP06241 537 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 RDXP35241 583 aaKnown RBP15.54■□□□□ 0.08
VCAN-211ENST00000513984 RPL22P35268 128 aaKnown RBP15.54■□□□□ 0.08
VCAN-211ENST00000513984 CDR1P51861 262 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 BCAR1P56945 870 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 PITX1P78337 314 aaPredicted RBP15.54■□□□□ 0.08
VCAN-211ENST00000513984 TUBB8Q3ZCM7 444 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 FAM43BQ6ZT52 329 aaPredicted RBP15.54■□□□□ 0.08
VCAN-211ENST00000513984 ZNF280BQ86YH2 543 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 COLGALT2Q8IYK4 626 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 THEM5Q8N1Q8 247 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 SCML4Q8N228 414 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 SH3TC2Q8TF17 1288 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 PRCCQ92733 491 aaPredicted RBP15.54■□□□□ 0.08
VCAN-211ENST00000513984 RBM15Q96T37 977 aaKnown RBP eCLIP15.54■□□□□ 0.08
VCAN-211ENST00000513984 ROPN1BQ9BZX4 212 aaPredicted RBP15.54■□□□□ 0.08
VCAN-211ENST00000513984 PHACTR1Q9C0D0 580 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 ROPN1Q9HAT0 212 aaPredicted RBP15.54■□□□□ 0.08
VCAN-211ENST00000513984 PNPLA8Q9NP80 782 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 TBC1D13Q9NVG8 400 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 DNAJC17Q9NVM6 304 aaKnown RBP15.54■□□□□ 0.08
VCAN-211ENST00000513984 TMEM161AQ9NX61 479 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 USP3Q9Y6I4 520 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 FNDC1Q4ZHG4 1894 aaPredicted RBP15.54■□□□□ 0.08
VCAN-211ENST00000513984 CFAP69A5D8W1 941 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 YJEFN3A6XGL0 299 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 E7ENQ6 273 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 NBNO60934 754 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 ACSL3O95573 720 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 ZFXP17010 805 aaPredicted RBP15.54■□□□□ 0.08
VCAN-211ENST00000513984 CTCFP49711 727 aaPredicted RBP15.54■□□□□ 0.08
VCAN-211ENST00000513984 RABGGTBP53611 331 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 GPNMBQ14956 572 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 DNAJC21Q5F1R6 531 aaKnown RBP15.54■□□□□ 0.08
VCAN-211ENST00000513984 C6orf118Q5T5N4 469 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 SYPL2Q5VXT5 272 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 DARS2Q6PI48 645 aaKnown RBP15.54■□□□□ 0.08
VCAN-211ENST00000513984 C1orf228Q6PIY5 440 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 BHLHA9Q7RTU4 235 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 ZC3H18Q86VM9 953 aaKnown RBP15.54■□□□□ 0.08
VCAN-211ENST00000513984 FAM131BQ86XD5 332 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 PPIL6Q8IXY8 311 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 ARFGAP2Q8N6H7 521 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 FAM71DQ8N9W8 422 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 RTP4Q96DX8 246 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 CSPG4P5Q96PW8 444 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 CAPS2Q9BXY5 557 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 RHOBTB2Q9BYZ6 727 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 UNC93B1Q9H1C4 597 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 ELAC1Q9H777 363 aaKnown RBP15.54■□□□□ 0.08
VCAN-211ENST00000513984 PRDM16Q9HAZ2 1276 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 DMAP1Q9NPF5 467 aaPredicted RBP15.54■□□□□ 0.08
VCAN-211ENST00000513984 PAK6Q9NQU5 681 aaPredicted RBP15.54■□□□□ 0.08
VCAN-211ENST00000513984 TMLHEQ9NVH6 421 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 NOVA2Q9UNW9 492 aaKnown RBP15.54■□□□□ 0.08
VCAN-211ENST00000513984 MICAL3Q7RTP6 2002 aa15.54■□□□□ 0.08
VCAN-211ENST00000513984 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.53■□□□□ 0.08
VCAN-211ENST00000513984 H7C0C1 242 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 M0QYT0 321 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 SMAPO00193 183 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 ZBED1O96006 694 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 LTFP02788 710 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 BDNFP23560 247 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 ATP5OP48047 213 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 TSPY1Q01534 308 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 KYNUQ16719 465 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 PLEKHG4Q58EX7 1191 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 MFSD5Q6N075 450 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 LRRTM3Q86VH5 581 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 NAT8LQ8N9F0 302 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 UHMK1Q8TAS1 419 aaKnown RBP15.53■□□□□ 0.08
VCAN-211ENST00000513984 IRGQQ8WZA9 623 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 CPT1BQ92523 772 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 PGAP3Q96FM1 320 aaPredicted RBP15.53■□□□□ 0.08
VCAN-211ENST00000513984 TMEM209Q96SK2 561 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 SLC9A7Q96T83 725 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 USP29Q9HBJ7 922 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 RRN3Q9NYV6 651 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 BCCIPQ9P287 314 aaKnown RBP eCLIP15.53■□□□□ 0.08
VCAN-211ENST00000513984 NAALADL1Q9UQQ1 740 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 PLXNA3P51805 1871 aa15.53■□□□□ 0.08
VCAN-211ENST00000513984 BCLAF3A2AJT9 711 aaKnown RBP15.52■□□□□ 0.08
VCAN-211ENST00000513984 PITPNM1O00562 1244 aa15.52■□□□□ 0.08
VCAN-211ENST00000513984 RASGRF2O14827 1237 aa15.52■□□□□ 0.08
VCAN-211ENST00000513984 ABHD2P08910 425 aa15.52■□□□□ 0.08
VCAN-211ENST00000513984 USP17L7P0C7H9 530 aa15.52■□□□□ 0.08
VCAN-211ENST00000513984 MAGEA4P43358 317 aa15.52■□□□□ 0.08
VCAN-211ENST00000513984 AIF1P55008 147 aa15.52■□□□□ 0.08
VCAN-211ENST00000513984 HTRA3P83110 453 aa15.52■□□□□ 0.08
VCAN-211ENST00000513984 YWHAHQ04917 246 aaPredicted RBP15.52■□□□□ 0.08
VCAN-211ENST00000513984 DEUP1Q05D60 604 aa15.52■□□□□ 0.08
VCAN-211ENST00000513984 TNFAIP8L3Q5GJ75 292 aa15.52■□□□□ 0.08
VCAN-211ENST00000513984 PM20D1Q6GTS8 502 aa15.52■□□□□ 0.08
VCAN-211ENST00000513984 EPS8L3Q8TE67 593 aaKnown RBP15.52■□□□□ 0.08
VCAN-211ENST00000513984 MAGEB5Q9BZ81 275 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms