RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 ZBED1O96006 694 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 LTFP02788 710 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 ITGB1P05556 798 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 RFC2P35250 354 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 MAGEA11P43364 429 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 HCAR3P49019 387 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 NDUFV1P49821 464 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 SULT1E1P49888 294 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 ITGA8P53708 1063 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 EIF3EP60228 445 aaKnown RBP8.71□□□□□ -1.02
RNF4-220ENST00000513578 SMARCB1Q12824 385 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 ELAVL2Q12926 359 aaKnown RBP8.71□□□□□ -1.02
RNF4-220ENST00000513578 MTFR1Q15390 333 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 NFE2Q16621 373 aaPredicted RBP8.71□□□□□ -1.02
RNF4-220ENST00000513578 TUBB8Q3ZCM7 444 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 RAB6CQ53S08 254 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 HABP4Q5JVS0 413 aaKnown RBP8.71□□□□□ -1.02
RNF4-220ENST00000513578 IZUMO3Q5VZ72 239 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 SCYL2Q6P3W7 929 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 VSTM1Q6UX27 236 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 BHLHA9Q7RTU4 235 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 GSTA5Q7RTV2 222 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 LRRTM3Q86VH5 581 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 HOOK3Q86VS8 718 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 NPAS4Q8IUM7 802 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 ZCCHC9Q8N567 271 aaKnown RBP8.71□□□□□ -1.02
RNF4-220ENST00000513578 PLD5Q8N7P1 536 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 ANKLE1Q8NAG6 615 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 OR10T2Q8NGX3 314 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 PCDH19Q8TAB3 1148 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 UBLCP1Q8WVY7 318 aaPredicted RBP8.71□□□□□ -1.02
RNF4-220ENST00000513578 P3H4Q92791 437 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 C8orf48Q96LL4 319 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 CALN1Q9BXU9 219 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 ADAM33Q9BZ11 813 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 ROPN1BQ9BZX4 212 aaPredicted RBP8.71□□□□□ -1.02
RNF4-220ENST00000513578 RAB6CQ9H0N0 254 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 RNF208Q9H0X6 261 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 ADAM7Q9H2U9 754 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 NRDE2Q9H7Z3 1164 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 ROPN1Q9HAT0 212 aaPredicted RBP8.71□□□□□ -1.02
RNF4-220ENST00000513578 TMEM30AQ9NV96 361 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 COMMD8Q9NX08 183 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 AP4E1Q9UPM8 1137 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 SHOC2Q9UQ13 582 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 ATP8A1Q9Y2Q0 1164 aa8.71□□□□□ -1.02
RNF4-220ENST00000513578 GOLGA6CA6NDK9 693 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 YJEFN3A6XGL0 299 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 DCDC2CA8MYV0 355 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 E7ENQ6 273 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 I3L4J1 428 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 TNFRSF10BO14763 440 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 NRP1O14786 923 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 EIF3HO15372 352 aaKnown RBP eCLIP8.7□□□□□ -1.02
RNF4-220ENST00000513578 RIPK2O43353 540 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 TCEA3O75764 348 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 EFEMP2O95967 443 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 IGLV3-25P01717 112 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 ALDH2P05091 517 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 ABHD2P08910 425 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 GOLGA6DP0CG33 693 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 RBP3P10745 1247 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 PECAM1P16284 738 aaPredicted RBP8.7□□□□□ -1.02
RNF4-220ENST00000513578 TFE3P19532 575 aaPredicted RBP8.7□□□□□ -1.02
RNF4-220ENST00000513578 FGFR3P22607 806 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 CYP2C18P33260 490 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 CACNA2D1P54289 1103 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 BCAR1P56945 870 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 SKOR1P84550 965 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 RNASELQ05823 741 aaKnown RBP8.7□□□□□ -1.02
RNF4-220ENST00000513578 ZNF844Q08AG5 666 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 FAAP100Q0VG06 881 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 MMRN1Q13201 1228 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 EIF4EBP2Q13542 120 aaPredicted RBP8.7□□□□□ -1.02
RNF4-220ENST00000513578 CA9Q16790 459 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 P3H1Q32P28 736 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 DCAF6Q58WW2 860 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 TTMPQ5BVD1 217 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 ZC3H12AQ5D1E8 599 aaKnown RBP8.7□□□□□ -1.02
RNF4-220ENST00000513578 RNASEH2BQ5TBB1 312 aaKnown RBP8.7□□□□□ -1.02
RNF4-220ENST00000513578 DENND2CQ68D51 928 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 BZW1Q7L1Q6 419 aaKnown RBP8.7□□□□□ -1.02
RNF4-220ENST00000513578 SPATA2LQ8IUW3 424 aaPredicted RBP8.7□□□□□ -1.02
RNF4-220ENST00000513578 ABI1Q8IZP0 508 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.7□□□□□ -1.02
RNF4-220ENST00000513578 RIN2Q8WYP3 895 aaPredicted RBP8.7□□□□□ -1.02
RNF4-220ENST00000513578 ARL8AQ96BM9 186 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 FAM149B1Q96BN6 582 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 HAUS1Q96CS2 278 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 PGM2Q96G03 612 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 ATP6V1G3Q96LB4 118 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 CEP295NLQ96MC4 621 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 KCTD15Q96SI1 283 aaPredicted RBP8.7□□□□□ -1.02
RNF4-220ENST00000513578 KCNK16Q96T55 309 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 FRMD8Q9BZ67 464 aaPredicted RBP8.7□□□□□ -1.02
RNF4-220ENST00000513578 SEMA4AQ9H3S1 761 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 USP29Q9HBJ7 922 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 TMLHEQ9NVH6 421 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 GOLGA6AQ9NYA3 693 aa8.7□□□□□ -1.02
RNF4-220ENST00000513578 IL37Q9NZH6 218 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms