RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 TMC5Q6UXY8 1006 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 GRASPQ7Z6J2 395 aaPredicted RBP13.1□□□□□ -0.31
PDPN-210ENST00000513143 GPR149Q86SP6 731 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 DEFB123Q8N688 67 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 NIPA2Q8N8Q9 360 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 MYLIPQ8WY64 445 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 CFAP57Q96MR6 1250 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 NPY6RQ99463 290 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 CNPY3Q9BT09 278 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 PIDD1Q9HB75 910 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 RRN3Q9NYV6 651 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 BRWD1Q9NSI6 2320 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 GRID2IPA4D2P6 1211 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 BUB1BO60566 1050 aaPredicted RBP13.09□□□□□ -0.31
PDPN-210ENST00000513143 TLR5O60602 858 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 TBX10O75333 385 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 PROSCO94903 275 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 ENDOD1O94919 500 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 MYL4P12829 197 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 PSMA2P25787 234 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 SDC4P31431 198 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 MAN1A1P33908 653 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 LTBRP36941 435 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 CCR2P41597 374 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 DLX2Q07687 328 aaPredicted RBP13.09□□□□□ -0.31
PDPN-210ENST00000513143 MESDQ14696 234 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 PRSS36Q5K4E3 855 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 HECTD3Q5T447 861 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 C11orf63Q6NUN7 778 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 KLHDC10Q6PID8 442 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 PDZD4Q76G19 769 aaPredicted RBP13.09□□□□□ -0.31
PDPN-210ENST00000513143 BNIPLQ7Z465 357 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 SLFN11Q7Z7L1 901 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 MICALL1Q8N3F8 863 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 LRRC57Q8N9N7 239 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 DQX1Q8TE96 717 aaKnown RBP13.09□□□□□ -0.31
PDPN-210ENST00000513143 RNF139Q8WU17 664 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 CENPIQ92674 756 aaPredicted RBP13.09□□□□□ -0.31
PDPN-210ENST00000513143 PGAP3Q96FM1 320 aaPredicted RBP13.09□□□□□ -0.31
PDPN-210ENST00000513143 GUCD1Q96NT3 240 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 CDK5RAP1Q96SZ6 601 aaKnown RBP13.09□□□□□ -0.31
PDPN-210ENST00000513143 IRX2Q9BZI1 471 aaPredicted RBP13.09□□□□□ -0.31
PDPN-210ENST00000513143 S1PR5Q9H228 398 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 ADAM7Q9H2U9 754 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 CCSER2Q9H7U1 834 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 OLA1Q9NTK5 396 aaKnown RBP13.09□□□□□ -0.31
PDPN-210ENST00000513143 MTMR10Q9NXD2 777 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 CLDND1Q9NY35 253 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 STAP1Q9ULZ2 295 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 CAPN6Q9Y6Q1 641 aa13.09□□□□□ -0.31
PDPN-210ENST00000513143 A0A1W2PRU2 124 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 C2orf78A6NCI8 922 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 SOBPA7XYQ1 873 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 NRG2O14511 850 aaPredicted RBP13.08□□□□□ -0.32
PDPN-210ENST00000513143 ZNF197O14709 1029 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 MOSPD3O75425 235 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 PALMO75781 387 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 OAS1P00973 400 aaKnown RBP13.08□□□□□ -0.32
PDPN-210ENST00000513143 IGLV3-25P01717 112 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 PFKLP17858 780 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 TFE3P19532 575 aaPredicted RBP13.08□□□□□ -0.32
PDPN-210ENST00000513143 PITX1P78337 314 aaPredicted RBP13.08□□□□□ -0.32
PDPN-210ENST00000513143 NTHL1P78549 312 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 ITIH3Q06033 890 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 EIF4EBP2Q13542 120 aaPredicted RBP13.08□□□□□ -0.32
PDPN-210ENST00000513143 C15orf59Q2T9L4 293 aaPredicted RBP13.08□□□□□ -0.32
PDPN-210ENST00000513143 OTUD1Q5VV17 481 aaPredicted RBP13.08□□□□□ -0.32
PDPN-210ENST00000513143 RSRC2Q7L4I2 434 aaKnown RBP13.08□□□□□ -0.32
PDPN-210ENST00000513143 STRADAQ7RTN6 431 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 TADA2BQ86TJ2 420 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 TRIM58Q8NG06 486 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 SHKBP1Q8TBC3 707 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 SLC39A7Q92504 469 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 MRPS31Q92665 395 aaKnown RBP13.08□□□□□ -0.32
PDPN-210ENST00000513143 MSLNLQ96KJ4 702 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 GCNAQ96QF7 691 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 TBCBQ99426 244 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 ADAM33Q9BZ11 813 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 ATXN3LQ9H3M9 355 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 SMOC2Q9H3U7 446 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 NUDT5Q9UKK9 219 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 ALG6Q9Y672 507 aa13.08□□□□□ -0.32
PDPN-210ENST00000513143 TMEM110-MUSTN1A8MSY1 372 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 M0QYT0 321 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 COCHO43405 550 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 KIF5CO60282 957 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 RNF8O76064 485 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 OLFM2O95897 454 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 TRUB2O95900 331 aaKnown RBP13.07□□□□□ -0.32
PDPN-210ENST00000513143 TBX18O95935 607 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 FOSL2P15408 326 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 DESP17661 470 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 MSNP26038 577 aaKnown RBP13.07□□□□□ -0.32
PDPN-210ENST00000513143 DDX6P26196 483 aaKnown RBP eCLIP13.07□□□□□ -0.32
PDPN-210ENST00000513143 ATP5C1P36542 298 aaKnown RBP13.07□□□□□ -0.32
PDPN-210ENST00000513143 SLC1A1P43005 524 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 SULT1E1P49888 294 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 CYP4F8P98187 520 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 ATP11AP98196 1134 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 SLC5A9Q2M3M2 681 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms