RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 VPS13AQ96RL7 3174 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 LINC01387J3KSC0 135 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 KIAA0391O15091 583 aaKnown RBP10.1□□□□□ -0.79
TRIO-220ENST00000512979 PPP6R2O75170 966 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 CHRNB1P11230 501 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 ALAS2P22557 587 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 ACAT1P24752 427 aaKnown RBP10.1□□□□□ -0.79
TRIO-220ENST00000512979 ARL4DP49703 201 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 CCR3P51677 355 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 MLLT6P55198 1093 aaPredicted RBP10.1□□□□□ -0.79
TRIO-220ENST00000512979 ASIC1P78348 528 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 MYL7Q01449 175 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 C19orf57Q0VDD7 668 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 LRRC32Q14392 662 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 PPP2R5DQ14738 602 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 NFE2Q16621 373 aaPredicted RBP10.1□□□□□ -0.79
TRIO-220ENST00000512979 ARHGAP29Q52LW3 1261 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 SDHAF4Q5VUM1 108 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 C1orf228Q6PIY5 440 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 LRFN4Q6PJG9 635 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 C6orf15Q6UXA7 325 aaPredicted RBP10.1□□□□□ -0.79
TRIO-220ENST00000512979 OSTM1Q86WC4 334 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 ADGRF2Q8IZF7 708 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 TMEM86AQ8N2M4 240 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 STKLD1Q8NE28 680 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 CXorf38Q8TB03 319 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 BPIFB1Q8TDL5 484 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 NELL1Q92832 810 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 DHX58Q96C10 678 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 PLPPR2Q96GM1 343 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 ANKRD36BP1Q96IX9 119 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 TM9SF2Q99805 663 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 ACBD6Q9BR61 282 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 SLC46A2Q9BY10 475 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 TRIM9Q9C026 710 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 CUEDC2Q9H467 287 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 CCDC86Q9H6F5 360 aaKnown RBP10.1□□□□□ -0.79
TRIO-220ENST00000512979 GTSE1Q9NYZ3 720 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 SIX4Q9UIU6 781 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 MAGED2Q9UNF1 606 aaPredicted RBP10.1□□□□□ -0.79
TRIO-220ENST00000512979 SMG5Q9UPR3 1016 aaKnown RBP10.1□□□□□ -0.79
TRIO-220ENST00000512979 SNX9Q9Y5X1 595 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 FANCMQ8IYD8 2048 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 COL4A2P08572 1712 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 PATJQ8NI35 1801 aa10.1□□□□□ -0.79
TRIO-220ENST00000512979 TICRRQ7Z2Z1 1910 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 SPTBN4Q9H254 2564 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 MYBPHLA2RUH7 354 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 ZNF233A6NK53 670 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 SPECC1L-ADORA2AF8WAN1 911 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 CUTAO60888 179 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 LILRB5O75023 590 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 YEATS4O95619 227 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 TNNC2P02585 160 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 CSH1P0DML2 217 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 CSH2P0DML3 217 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 HMGA1P17096 107 aaKnown RBP10.09□□□□□ -0.79
TRIO-220ENST00000512979 CYP2F1P24903 491 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 DDX6P26196 483 aaKnown RBP eCLIP10.09□□□□□ -0.79
TRIO-220ENST00000512979 MAOBP27338 520 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 AVPR1AP37288 418 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 MAP2K3P46734 347 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 NLRP12P59046 1061 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 AMPD3Q01432 767 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 TNK2Q07912 1038 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 MYO1EQ12965 1108 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 SQSTM1Q13501 440 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 POU4F3Q15319 338 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 FOXD4L6Q3SYB3 417 aaPredicted RBP10.09□□□□□ -0.79
TRIO-220ENST00000512979 FOXD4L3Q6VB84 417 aaPredicted RBP10.09□□□□□ -0.79
TRIO-220ENST00000512979 TMEM150AQ86TG1 271 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 RALGPS2Q86X27 583 aaPredicted RBP10.09□□□□□ -0.79
TRIO-220ENST00000512979 CBWD2Q8IUF1 395 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 HSCBQ8IWL3 235 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 CMTM8Q8IZV2 173 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 TOP6BLQ8N6T0 577 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 CELF5Q8N6W0 485 aaKnown RBP10.09□□□□□ -0.79
TRIO-220ENST00000512979 MAB21L3Q8N8X9 362 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 IQUBQ8NA54 791 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 ZSCAN1Q8NBB4 408 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 LEO1Q8WVC0 666 aaPredicted RBP10.09□□□□□ -0.79
TRIO-220ENST00000512979 FAM126AQ9BYI3 521 aaPredicted RBP10.09□□□□□ -0.79
TRIO-220ENST00000512979 NRSN2Q9GZP1 204 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 EPC1Q9H2F5 836 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 RBM12Q9NTZ6 932 aaKnown RBP10.09□□□□□ -0.79
TRIO-220ENST00000512979 INTS13Q9NVM9 706 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 THG1LQ9NWX6 298 aaKnown RBP10.09□□□□□ -0.79
TRIO-220ENST00000512979 GDAP2Q9NXN4 497 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 HSPBP1Q9NZL4 362 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 NCDNQ9UBB6 729 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 PFDN2Q9UHV9 154 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 ZMYM5Q9UJ78 669 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 STARD13Q9Y3M8 1113 aa10.09□□□□□ -0.79
TRIO-220ENST00000512979 PTPRJQ12913 1337 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 TCHHQ07283 1943 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 EIF3DO15371 548 aaKnown RBP eCLIP10.08□□□□□ -0.8
TRIO-220ENST00000512979 HCRTO43612 131 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 DNAJC6O75061 913 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 TDGF1P13385 188 aa10.08□□□□□ -0.8
TRIO-220ENST00000512979 PCSK1P29120 753 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms