RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 GABRB3P28472 473 aa6.26□□□□□ -1.41
CHD1-209ENST00000512844 BFSP2Q13515 415 aa6.26□□□□□ -1.41
CHD1-209ENST00000512844 UBE4AQ14139 1066 aa6.26□□□□□ -1.41
CHD1-209ENST00000512844 MPEG1Q2M385 716 aa6.26□□□□□ -1.41
CHD1-209ENST00000512844 ABLIM2Q6H8Q1 611 aa6.26□□□□□ -1.41
CHD1-209ENST00000512844 TLDC1Q6P9B6 456 aa6.26□□□□□ -1.41
CHD1-209ENST00000512844 DCDC5Q6ZRR9 648 aa6.26□□□□□ -1.41
CHD1-209ENST00000512844 RASGRP3Q8IV61 690 aa6.26□□□□□ -1.41
CHD1-209ENST00000512844 MAFAQ8NHW3 353 aaPredicted RBP6.26□□□□□ -1.41
CHD1-209ENST00000512844 SUN3Q8TAQ9 357 aa6.26□□□□□ -1.41
CHD1-209ENST00000512844 NECTIN3Q9NQS3 549 aa6.26□□□□□ -1.41
CHD1-209ENST00000512844 SLC39A10Q9ULF5 831 aa6.26□□□□□ -1.41
CHD1-209ENST00000512844 CERS1P27544 350 aa6.25□□□□□ -1.41
CHD1-209ENST00000512844 ATP1A4Q13733 1029 aa6.25□□□□□ -1.41
CHD1-209ENST00000512844 KCNB1Q14721 858 aa6.25□□□□□ -1.41
CHD1-209ENST00000512844 PROSER3Q2NL68 480 aa6.25□□□□□ -1.41
CHD1-209ENST00000512844 ARHGAP15Q53QZ3 475 aa6.25□□□□□ -1.41
CHD1-209ENST00000512844 RAP1GAP2Q684P5 730 aa6.25□□□□□ -1.41
CHD1-209ENST00000512844 KIAA0408Q6ZU52 694 aa6.25□□□□□ -1.41
CHD1-209ENST00000512844 BCDIN3DQ7Z5W3 292 aaKnown RBP6.25□□□□□ -1.41
CHD1-209ENST00000512844 MORC1Q86VD1 984 aa6.25□□□□□ -1.41
CHD1-209ENST00000512844 C12orf76Q8N812 135 aaPredicted RBP6.25□□□□□ -1.41
CHD1-209ENST00000512844 GLIS1Q8NBF1 620 aa6.25□□□□□ -1.41
CHD1-209ENST00000512844 CTHRC1Q96CG8 243 aa6.25□□□□□ -1.41
CHD1-209ENST00000512844 MPHOSPH6Q99547 160 aaKnown RBP6.25□□□□□ -1.41
CHD1-209ENST00000512844 AS3MTQ9HBK9 375 aa6.25□□□□□ -1.41
CHD1-209ENST00000512844 CA14Q9ULX7 337 aa6.25□□□□□ -1.41
CHD1-209ENST00000512844 ARHGEF17Q96PE2 2063 aaPredicted RBP6.25□□□□□ -1.41
CHD1-209ENST00000512844 AOX1Q06278 1338 aa6.25□□□□□ -1.41
CHD1-209ENST00000512844 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.24□□□□□ -1.41
CHD1-209ENST00000512844 PRRT4C9JH25 899 aa6.24□□□□□ -1.41
CHD1-209ENST00000512844 ADAMTS3O15072 1205 aa6.24□□□□□ -1.41
CHD1-209ENST00000512844 SETSIPP0DME0 302 aa6.24□□□□□ -1.41
CHD1-209ENST00000512844 ARP10275 920 aa6.24□□□□□ -1.41
CHD1-209ENST00000512844 PECAM1P16284 738 aaPredicted RBP6.24□□□□□ -1.41
CHD1-209ENST00000512844 MMP8P22894 467 aa6.24□□□□□ -1.41
CHD1-209ENST00000512844 MCM5P33992 734 aa6.24□□□□□ -1.41
CHD1-209ENST00000512844 PROK1P58294 105 aa6.24□□□□□ -1.41
CHD1-209ENST00000512844 C21orf58P58505 322 aa6.24□□□□□ -1.41
CHD1-209ENST00000512844 CFHR3Q02985 330 aa6.24□□□□□ -1.41
CHD1-209ENST00000512844 SRSF4Q08170 494 aaKnown RBP6.24□□□□□ -1.41
CHD1-209ENST00000512844 ACOX1Q15067 660 aa6.24□□□□□ -1.41
CHD1-209ENST00000512844 MIS18BP1Q6P0N0 1132 aa6.24□□□□□ -1.41
CHD1-209ENST00000512844 KRT27Q7Z3Y8 459 aa6.24□□□□□ -1.41
CHD1-209ENST00000512844 CHSY1Q86X52 802 aa6.24□□□□□ -1.41
CHD1-209ENST00000512844 MYLK4Q86YV6 388 aaPredicted RBP6.24□□□□□ -1.41
CHD1-209ENST00000512844 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.24□□□□□ -1.41
CHD1-209ENST00000512844 ADGRE3Q9BY15 652 aa6.24□□□□□ -1.41
CHD1-209ENST00000512844 SEMA4CQ9C0C4 833 aa6.24□□□□□ -1.41
CHD1-209ENST00000512844 HELLSQ9NRZ9 838 aa6.24□□□□□ -1.41
CHD1-209ENST00000512844 CA12O43570 354 aa6.23□□□□□ -1.41
CHD1-209ENST00000512844 RBMXL2O75526 392 aaKnown RBP6.23□□□□□ -1.41
CHD1-209ENST00000512844 TMIGD3P0DMS9 266 aaPredicted RBP6.23□□□□□ -1.41
CHD1-209ENST00000512844 CYP2D6P10635 497 aa6.23□□□□□ -1.41
CHD1-209ENST00000512844 FBLP22087 321 aaKnown RBP6.23□□□□□ -1.41
CHD1-209ENST00000512844 HTR7P34969 479 aa6.23□□□□□ -1.41
CHD1-209ENST00000512844 PPM1AP35813 382 aa6.23□□□□□ -1.41
CHD1-209ENST00000512844 SEMA3BQ13214 749 aa6.23□□□□□ -1.41
CHD1-209ENST00000512844 CBFBQ13951 182 aa6.23□□□□□ -1.41
CHD1-209ENST00000512844 CSHL1Q14406 222 aa6.23□□□□□ -1.41
CHD1-209ENST00000512844 MFSD13AQ14CX5 517 aa6.23□□□□□ -1.41
CHD1-209ENST00000512844 SRSF7Q16629 238 aaKnown RBP eCLIP6.23□□□□□ -1.41
CHD1-209ENST00000512844 XRRA1Q6P2D8 792 aa6.23□□□□□ -1.41
CHD1-209ENST00000512844 PGBD2Q6P3X8 592 aa6.23□□□□□ -1.41
CHD1-209ENST00000512844 C1orf228Q6PIY5 440 aa6.23□□□□□ -1.41
CHD1-209ENST00000512844 GATAD2AQ86YP4 633 aa6.23□□□□□ -1.41
CHD1-209ENST00000512844 SAMD3Q8N6K7 520 aa6.23□□□□□ -1.41
CHD1-209ENST00000512844 TMEM41AQ96HV5 264 aa6.23□□□□□ -1.41
CHD1-209ENST00000512844 HIC2Q96JB3 615 aa6.23□□□□□ -1.41
CHD1-209ENST00000512844 NUDT22Q9BRQ3 303 aa6.23□□□□□ -1.41
CHD1-209ENST00000512844 STK33Q9BYT3 514 aa6.23□□□□□ -1.41
CHD1-209ENST00000512844 NRIP3Q9NQ35 241 aa6.23□□□□□ -1.41
CHD1-209ENST00000512844 TTC34A8MYJ7 566 aa6.22□□□□□ -1.41
CHD1-209ENST00000512844 PLA2G6O60733 806 aa6.22□□□□□ -1.41
CHD1-209ENST00000512844 GLP2RO95838 553 aa6.22□□□□□ -1.41
CHD1-209ENST00000512844 APEHP13798 732 aaKnown RBP6.22□□□□□ -1.41
CHD1-209ENST00000512844 PBX1P40424 430 aa6.22□□□□□ -1.41
CHD1-209ENST00000512844 JAK3P52333 1124 aa6.22□□□□□ -1.41
CHD1-209ENST00000512844 DEUP1Q05D60 604 aa6.22□□□□□ -1.41
CHD1-209ENST00000512844 ZNF268Q14587 947 aaPredicted RBP6.22□□□□□ -1.41
CHD1-209ENST00000512844 LARS2Q15031 903 aaKnown RBP6.22□□□□□ -1.41
CHD1-209ENST00000512844 RAB30Q15771 203 aa6.22□□□□□ -1.41
CHD1-209ENST00000512844 EZH2Q15910 746 aaKnown RBP6.22□□□□□ -1.41
CHD1-209ENST00000512844 PFKFB3Q16875 520 aaPredicted RBP6.22□□□□□ -1.41
CHD1-209ENST00000512844 CCDC142Q17RM4 750 aa6.22□□□□□ -1.41
CHD1-209ENST00000512844 TMEM196Q5HYL7 178 aa6.22□□□□□ -1.41
CHD1-209ENST00000512844 ZNF575Q86XF7 245 aa6.22□□□□□ -1.41
CHD1-209ENST00000512844 OVCA2Q8WZ82 227 aa6.22□□□□□ -1.41
CHD1-209ENST00000512844 RITA1Q96K30 269 aa6.22□□□□□ -1.41
CHD1-209ENST00000512844 CHST12Q9NRB3 414 aa6.22□□□□□ -1.41
CHD1-209ENST00000512844 FLRT1Q9NZU1 646 aa6.22□□□□□ -1.41
CHD1-209ENST00000512844 FNIP2Q9P278 1114 aa6.22□□□□□ -1.41
CHD1-209ENST00000512844 CDC23Q9UJX2 597 aa6.22□□□□□ -1.41
CHD1-209ENST00000512844 ASAP1Q9ULH1 1129 aa6.22□□□□□ -1.41
CHD1-209ENST00000512844 PNMA6EA0A0J9YXQ4 647 aa6.21□□□□□ -1.42
CHD1-209ENST00000512844 TISP43B9A030 160 aa6.21□□□□□ -1.42
CHD1-209ENST00000512844 CLIC1O00299 241 aa6.21□□□□□ -1.42
CHD1-209ENST00000512844 FFAR2O15552 330 aa6.21□□□□□ -1.42
CHD1-209ENST00000512844 ALDH18A1P54886 795 aaKnown RBP6.21□□□□□ -1.42
CHD1-209ENST00000512844 TNFAIP2Q03169 654 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms