RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 LARP1BQ659C4 914 aaKnown RBP16.87■□□□□ 0.29
DDR1-269ENST00000512725 SCARA5Q6ZMJ2 495 aa16.87■□□□□ 0.29
DDR1-269ENST00000512725 STXBP4Q6ZWJ1 553 aa16.87■□□□□ 0.29
DDR1-269ENST00000512725 HTR3DQ70Z44 454 aa16.87■□□□□ 0.29
DDR1-269ENST00000512725 FAM124AQ86V42 546 aa16.87■□□□□ 0.29
DDR1-269ENST00000512725 DNASE2BQ8WZ79 361 aa16.87■□□□□ 0.29
DDR1-269ENST00000512725 SIPA1Q96FS4 1042 aa16.87■□□□□ 0.29
DDR1-269ENST00000512725 SMC3Q9UQE7 1217 aa16.87■□□□□ 0.29
DDR1-269ENST00000512725 SETXQ7Z333 2677 aaKnown RBP16.86■□□□□ 0.29
DDR1-269ENST00000512725 MYH10P35580 1976 aa16.86■□□□□ 0.29
DDR1-269ENST00000512725 SHROOM3Q8TF72 1996 aa16.86■□□□□ 0.29
DDR1-269ENST00000512725 KCNJ18B7U540 433 aa16.86■□□□□ 0.29
DDR1-269ENST00000512725 GFRA2O00451 464 aa16.86■□□□□ 0.29
DDR1-269ENST00000512725 FLRT2O43155 660 aa16.86■□□□□ 0.29
DDR1-269ENST00000512725 STAT6P42226 847 aa16.86■□□□□ 0.29
DDR1-269ENST00000512725 CSNK1EP49674 416 aaKnown RBP16.86■□□□□ 0.29
DDR1-269ENST00000512725 TUBP50607 506 aa16.86■□□□□ 0.29
DDR1-269ENST00000512725 CYP2J2P51589 502 aa16.86■□□□□ 0.29
DDR1-269ENST00000512725 CDH8P55286 799 aa16.86■□□□□ 0.29
DDR1-269ENST00000512725 CCDC65Q8IXS2 484 aa16.86■□□□□ 0.29
DDR1-269ENST00000512725 PRCCQ92733 491 aaPredicted RBP16.86■□□□□ 0.29
DDR1-269ENST00000512725 JAKMIP2Q96AA8 810 aa16.86■□□□□ 0.29
DDR1-269ENST00000512725 SMARCD1Q96GM5 515 aa16.86■□□□□ 0.29
DDR1-269ENST00000512725 CLIC6Q96NY7 704 aa16.86■□□□□ 0.29
DDR1-269ENST00000512725 KIF2CQ99661 725 aa16.86■□□□□ 0.29
DDR1-269ENST00000512725 KIAA1586Q9HCI6 787 aa16.86■□□□□ 0.29
DDR1-269ENST00000512725 TLR8Q9NR97 1041 aaKnown RBP16.86■□□□□ 0.29
DDR1-269ENST00000512725 KRT82Q9NSB4 513 aa16.86■□□□□ 0.29
DDR1-269ENST00000512725 BTBD3Q9Y2F9 522 aa16.86■□□□□ 0.29
DDR1-269ENST00000512725 GTF3C3Q9Y5Q9 886 aa16.86■□□□□ 0.29
DDR1-269ENST00000512725 CLIC4Q9Y696 253 aa16.86■□□□□ 0.29
DDR1-269ENST00000512725 CLIC2O15247 247 aa16.85■□□□□ 0.29
DDR1-269ENST00000512725 ZNF883P0CG24 379 aa16.85■□□□□ 0.29
DDR1-269ENST00000512725 OXTRP30559 389 aa16.85■□□□□ 0.29
DDR1-269ENST00000512725 ATP5C1P36542 298 aaKnown RBP16.85■□□□□ 0.29
DDR1-269ENST00000512725 PGFP49763 221 aa16.85■□□□□ 0.29
DDR1-269ENST00000512725 TPMTP51580 245 aa16.85■□□□□ 0.29
DDR1-269ENST00000512725 MYL6P60660 151 aa16.85■□□□□ 0.29
DDR1-269ENST00000512725 BNC1Q01954 994 aa16.85■□□□□ 0.29
DDR1-269ENST00000512725 CEBPZQ03701 1054 aaKnown RBP16.85■□□□□ 0.29
DDR1-269ENST00000512725 SNRNP35Q16560 246 aaKnown RBP16.85■□□□□ 0.29
DDR1-269ENST00000512725 SNX30Q5VWJ9 437 aa16.85■□□□□ 0.29
DDR1-269ENST00000512725 BRAPQ7Z569 592 aa16.85■□□□□ 0.29
DDR1-269ENST00000512725 TMPRSS6Q8IU80 811 aa16.85■□□□□ 0.29
DDR1-269ENST00000512725 CADM4Q8NFZ8 388 aa16.85■□□□□ 0.29
DDR1-269ENST00000512725 HPS3Q969F9 1004 aa16.85■□□□□ 0.29
DDR1-269ENST00000512725 TMX3Q96JJ7 454 aa16.85■□□□□ 0.29
DDR1-269ENST00000512725 UBL7Q96S82 380 aaPredicted RBP16.85■□□□□ 0.29
DDR1-269ENST00000512725 CGRRF1Q99675 332 aa16.85■□□□□ 0.29
DDR1-269ENST00000512725 KLF16Q9BXK1 252 aaPredicted RBP16.85■□□□□ 0.29
DDR1-269ENST00000512725 MKRN2Q9H000 416 aaKnown RBP16.85■□□□□ 0.29
DDR1-269ENST00000512725 SMYD3Q9H7B4 428 aa16.85■□□□□ 0.29
DDR1-269ENST00000512725 ITM2CQ9NQX7 267 aa16.85■□□□□ 0.29
DDR1-269ENST00000512725 TOR4AQ9NXH8 423 aa16.85■□□□□ 0.29
DDR1-269ENST00000512725 DKK4Q9UBT3 224 aa16.85■□□□□ 0.29
DDR1-269ENST00000512725 NUDT5Q9UKK9 219 aa16.85■□□□□ 0.29
DDR1-269ENST00000512725 ASXL3Q9C0F0 2248 aa16.85■□□□□ 0.29
DDR1-269ENST00000512725 MDM4O15151 490 aa16.84■□□□□ 0.29
DDR1-269ENST00000512725 FAM163BP0C2L3 166 aa16.84■□□□□ 0.29
DDR1-269ENST00000512725 CCDC130P13994 396 aa16.84■□□□□ 0.29
DDR1-269ENST00000512725 IL12RB1P42701 662 aa16.84■□□□□ 0.29
DDR1-269ENST00000512725 MAP3K7CLP57077 242 aa16.84■□□□□ 0.29
DDR1-269ENST00000512725 ORC1Q13415 861 aa16.84■□□□□ 0.29
DDR1-269ENST00000512725 CCDC73Q6ZRK6 1079 aa16.84■□□□□ 0.29
DDR1-269ENST00000512725 ACOT1Q86TX2 421 aa16.84■□□□□ 0.29
DDR1-269ENST00000512725 SCUBE3Q8IX30 993 aa16.84■□□□□ 0.29
DDR1-269ENST00000512725 PDCD7Q8N8D1 485 aaKnown RBP16.84■□□□□ 0.29
DDR1-269ENST00000512725 BAHD1Q8TBE0 780 aaPredicted RBP16.84■□□□□ 0.29
DDR1-269ENST00000512725 UCMAQ8WVF2 138 aa16.84■□□□□ 0.29
DDR1-269ENST00000512725 SYAP1Q96A49 352 aaPredicted RBP16.84■□□□□ 0.29
DDR1-269ENST00000512725 ELMO3Q96BJ8 720 aa16.84■□□□□ 0.29
DDR1-269ENST00000512725 TNIP3Q96KP6 325 aa16.84■□□□□ 0.29
DDR1-269ENST00000512725 NUP58Q9BVL2 599 aa16.84■□□□□ 0.29
DDR1-269ENST00000512725 FBXO44Q9H4M3 255 aa16.84■□□□□ 0.29
DDR1-269ENST00000512725 COMMD8Q9NX08 183 aa16.84■□□□□ 0.29
DDR1-269ENST00000512725 USP36Q9P275 1121 aaKnown RBP16.84■□□□□ 0.29
DDR1-269ENST00000512725 VPS37CA5D8V6 355 aaPredicted RBP16.83■□□□□ 0.28
DDR1-269ENST00000512725 METTL12A8MUP2 240 aa16.83■□□□□ 0.28
DDR1-269ENST00000512725 KCNK3O14649 394 aa16.83■□□□□ 0.28
DDR1-269ENST00000512725 CISD3P0C7P0 127 aa16.83■□□□□ 0.28
DDR1-269ENST00000512725 ZDHHC11BP0C7U3 371 aa16.83■□□□□ 0.28
DDR1-269ENST00000512725 ARID5AQ03989 594 aa16.83■□□□□ 0.28
DDR1-269ENST00000512725 BIRC3Q13489 604 aa16.83■□□□□ 0.28
DDR1-269ENST00000512725 DHRS13Q6UX07 377 aa16.83■□□□□ 0.28
DDR1-269ENST00000512725 PAQR9Q6ZVX9 377 aa16.83■□□□□ 0.28
DDR1-269ENST00000512725 METTL3Q86U44 580 aaKnown RBP16.83■□□□□ 0.28
DDR1-269ENST00000512725 PDILTQ8N807 584 aa16.83■□□□□ 0.28
DDR1-269ENST00000512725 ENGASEQ8NFI3 743 aa16.83■□□□□ 0.28
DDR1-269ENST00000512725 SLC39A7Q92504 469 aa16.83■□□□□ 0.28
DDR1-269ENST00000512725 DUSP9Q99956 384 aaKnown RBP16.83■□□□□ 0.28
DDR1-269ENST00000512725 MARK1Q9P0L2 795 aa16.83■□□□□ 0.28
DDR1-269ENST00000512725 NFE2L3Q9Y4A8 694 aa16.83■□□□□ 0.28
DDR1-269ENST00000512725 PCDHGB2Q9Y5G2 931 aa16.83■□□□□ 0.28
DDR1-269ENST00000512725 SNX11Q9Y5W9 270 aa16.83■□□□□ 0.28
DDR1-269ENST00000512725 A0A087WV48 116 aa16.82■□□□□ 0.28
DDR1-269ENST00000512725 FRMD3A2A2Y4 597 aa16.82■□□□□ 0.28
DDR1-269ENST00000512725 PLK4O00444 970 aa16.82■□□□□ 0.28
DDR1-269ENST00000512725 CYP26A1O43174 497 aa16.82■□□□□ 0.28
DDR1-269ENST00000512725 BEST1O76090 585 aa16.82■□□□□ 0.28
DDR1-269ENST00000512725 HLA-EP13747 358 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms