RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 PPM1KQ8N3J5 372 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 C3orf58Q8NDZ4 430 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 TRIM58Q8NG06 486 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 OR5B17Q8NGF7 314 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 EPS8L1Q8TE68 723 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 NIF3L1Q9GZT8 377 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 GOLGA2P5Q9HBQ8 144 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 FSCN3Q9NQT6 498 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 ADAMTS1Q9UHI8 967 aa11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 NOCTQ9UK39 431 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 NUP210Q8TEM1 1887 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-217ENST00000512274 LAMA1P25391 3075 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 MYO16Q9Y6X6 1858 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 LACTBL1A8MY62 500 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 H0Y626 953 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 DDX3XO00571 662 aaKnown RBP eCLIP11.07□□□□□ -0.648e-10■■■□□ 15.6
PDLIM5-217ENST00000512274 RECQL4O94761 1208 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 TRIM16O95361 564 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 FAM163BP0C2L3 166 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 CXCL8P10145 99 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 PLA2G2AP14555 144 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 MAGEA1P43355 309 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 GRSF1Q12849 480 aaKnown RBP eCLIP11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 ITPRIPL2Q3MIP1 535 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 DNTTIP2Q5QJE6 756 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 CCDC122Q5T0U0 273 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 SLC8B1Q6J4K2 584 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 TRIM72Q6ZMU5 477 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 RAB44Q7Z6P3 723 aaPredicted RBP11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 KIAA1328Q86T90 577 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 LURAP1LQ8IV03 231 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 LRRC52Q8N7C0 313 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 PNPLA1Q8N8W4 532 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 FAM84AQ96KN4 292 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 NUSAP1Q9BXS6 441 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 MTMR12Q9C0I1 747 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 LACRTQ9GZZ8 138 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 ISCUQ9H1K1 167 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 CYP3A43Q9HB55 503 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 APOBEC3GQ9HC16 384 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 SIX4Q9UIU6 781 aa11.07□□□□□ -0.64
PDLIM5-217ENST00000512274 LOC400499M0QZD8 3231 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 ANKRD62A6NC57 917 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 RCCD1A6NED2 376 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 XPOTO43592 962 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 C1QL1O75973 258 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 APBB3O95704 486 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 TMEM253P0C7T8 217 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 PRLRP16471 622 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 ENGP17813 658 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 PAX3P23760 479 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 YARSP54577 528 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 GNG11P61952 73 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 CDR2Q01850 454 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 GFPT1Q06210 699 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 LMAN2Q12907 356 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 DMC1Q14565 340 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 TMEM132DQ14C87 1099 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 IFI16Q16666 785 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 TMEM196Q5HYL7 178 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 ARMCX6Q7L4S7 300 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 PIP4P1Q86T03 277 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 C1orf127Q8N9H9 656 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 RPLP0P6Q8NHW5 317 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 TATDN2Q93075 761 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 AGPAT1Q99943 283 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 FBRSL1Q9HCM7 1045 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 DNAI1Q9UI46 699 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 MBD1Q9UIS9 605 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 CITO14578 2027 aa11.06□□□□□ -0.64
PDLIM5-217ENST00000512274 KIAA1549LQ6ZVL6 1849 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 TNRC6BQ9UPQ9 1833 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 TULP1O00294 542 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 FANCGO15287 622 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 TRAPPC3O43617 180 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 PHACTR2O75167 634 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 MTA2O94776 668 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 NFICP08651 508 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 H2AFZP0C0S5 128 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 P4HA1P13674 534 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 CYP11B1P15538 503 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 PDE6CP51160 858 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 EPHA5P54756 1037 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 TUBB4BP68371 445 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 RBP5P82980 135 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 CYP27A1Q02318 531 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 INCA1Q0VD86 236 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 SEMA3BQ13214 749 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 TRPC3Q13507 836 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 ARHGAP44Q17R89 818 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 CTXN3Q4LDR2 81 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 USP39Q53GS9 565 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 GPR158Q5T848 1215 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 PAPD7Q5XG87 772 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 NAIF1Q69YI7 327 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 JADE1Q6IE81 842 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 SYT10Q6XYQ8 523 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 H2AFVQ71UI9 128 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 ZNF605Q86T29 641 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 TTC30AQ86WT1 665 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms