RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 TAS2R40P59535 323 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 MRPS5P82675 430 aaKnown RBP8.44□□□□□ -1.06
HTT-209ENST00000512068 ATP11AP98196 1134 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 IFRD2Q12894 506 aaPredicted RBP8.44□□□□□ -1.06
HTT-209ENST00000512068 DHX34Q14147 1143 aaKnown RBP8.44□□□□□ -1.06
HTT-209ENST00000512068 BTG3Q14201 252 aaPredicted RBP8.44□□□□□ -1.06
HTT-209ENST00000512068 OCLNQ16625 522 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 TFDP3Q5H9I0 405 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 KAZNQ674X7 775 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 FAM117BQ6P1L5 589 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 FAM171BQ6P995 826 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.44□□□□□ -1.06
HTT-209ENST00000512068 ANKS3Q6ZW76 656 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 SND1Q7KZF4 910 aaKnown RBP eCLIP8.44□□□□□ -1.06
HTT-209ENST00000512068 ARCQ7LC44 396 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 SCN4BQ8IWT1 228 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 CCDC105Q8IYK2 499 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 FAM172AQ8WUF8 416 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 ANKRD7Q92527 254 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 HSPH1Q92598 858 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 TMEM169Q96HH4 297 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 FUBP3Q96I24 572 aaKnown RBP eCLIP8.44□□□□□ -1.06
HTT-209ENST00000512068 CCDC114Q96M63 670 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 CFAP57Q96MR6 1250 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 ZNF558Q96NG5 402 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 YME1L1Q96TA2 773 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 TTPALQ9BTX7 342 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 PARD6BQ9BYG5 372 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 OSBPL8Q9BZF1 889 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 MCOLN1Q9GZU1 580 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 MTIF3Q9H2K0 278 aaKnown RBP8.44□□□□□ -1.06
HTT-209ENST00000512068 POPDC2Q9HBU9 364 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 ARFGAP3Q9NP61 516 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 PNPLA8Q9NP80 782 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 IL23AQ9NPF7 189 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.44□□□□□ -1.06
HTT-209ENST00000512068 RRN3Q9NYV6 651 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 STIM2Q9P246 746 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 PCSK1NQ9UHG2 260 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 FEZ2Q9UHY8 353 aaPredicted RBP8.44□□□□□ -1.06
HTT-209ENST00000512068 USP18Q9UMW8 372 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 LTBP2Q14767 1821 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 MYO16Q9Y6X6 1858 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 PTPRDP23468 1912 aa8.44□□□□□ -1.06
HTT-209ENST00000512068 TRIM43BA6NCK2 446 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 NT5C1B-RDH14C9J2C7 533 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 F8W810 466 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 LRCH4O75427 683 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 DGKIO75912 1065 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 TRUB2O95900 331 aaKnown RBP8.43□□□□□ -1.06
HTT-209ENST00000512068 GAS8O95995 478 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 ZBED1O96006 694 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 GALTP07902 379 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 RALAP11233 206 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 MIPP30301 263 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 NOS2P35228 1153 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 PPM1AP35813 382 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 FLT3P36888 993 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 MATKP42679 507 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 PTPN9P43378 593 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 TNNT3P45378 269 aaPredicted RBP8.43□□□□□ -1.06
HTT-209ENST00000512068 RPL34P49207 117 aaKnown RBP8.43□□□□□ -1.06
HTT-209ENST00000512068 FNTAP49354 379 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 YWHAZP63104 245 aaKnown RBP8.43□□□□□ -1.06
HTT-209ENST00000512068 DR1Q01658 176 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 OGDHQ02218 1023 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 LMNB2Q03252 620 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 FPGSQ05932 587 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 ZNF252P-AS1Q0IIN9 211 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 PDK2Q15119 407 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 PPP1R7Q15435 360 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 TCTN1Q2MV58 587 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 C15orf59Q2T9L4 293 aaPredicted RBP8.43□□□□□ -1.06
HTT-209ENST00000512068 SMTNL2Q2TAL5 461 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 USP41Q3LFD5 358 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 BOLA3Q53S33 107 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 DCAF6Q58WW2 860 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 KIAA0319Q5VV43 1072 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 DAB2IPQ5VWQ8 1189 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 WDR93Q6P2C0 686 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 VSTM1Q6UX27 236 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 CD300LGQ6UXG3 332 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 SPOCD1Q6ZMY3 1216 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 CPNE8Q86YQ8 564 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 RFX6Q8HWS3 928 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 CMTR2Q8IYT2 770 aaKnown RBP8.43□□□□□ -1.06
HTT-209ENST00000512068 OR10T2Q8NGX3 314 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 SPPL2BQ8TCT7 592 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 CLEC4CQ8WTT0 213 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 C2orf15Q8WU43 125 aaKnown RBP8.43□□□□□ -1.06
HTT-209ENST00000512068 IRGQQ8WZA9 623 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 TOP1MTQ969P6 601 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 TRIM43Q96BQ3 446 aaPredicted RBP8.43□□□□□ -1.06
HTT-209ENST00000512068 SLITRK1Q96PX8 696 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 TBCBQ99426 244 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 SMOQ99835 787 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 RTP3Q9BQQ7 232 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 LRRC1Q9BTT6 524 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 CALN1Q9BXU9 219 aa8.43□□□□□ -1.06
HTT-209ENST00000512068 ULBP1Q9BZM6 244 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms