RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ELOVL4Q9GZR5 314 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 MKRN2Q9H000 416 aaKnown RBP12.27□□□□□ -0.45
RNF4-216ENST00000511859 CLMPQ9H6B4 373 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.27□□□□□ -0.45
RNF4-216ENST00000511859 RBAKQ9NYW8 714 aaPredicted RBP12.27□□□□□ -0.45
RNF4-216ENST00000511859 MARK1Q9P0L2 795 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 STON1Q9Y6Q2 735 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 CISD3P0C7P0 127 aa12.26□□□□□ -0.45
RNF4-216ENST00000511859 ACADMP11310 421 aa12.26□□□□□ -0.45
RNF4-216ENST00000511859 GARTP22102 1010 aa12.26□□□□□ -0.45
RNF4-216ENST00000511859 UBA7P41226 1012 aa12.26□□□□□ -0.45
RNF4-216ENST00000511859 KCNC4Q03721 635 aa12.26□□□□□ -0.45
RNF4-216ENST00000511859 ORC1Q13415 861 aa12.26□□□□□ -0.45
RNF4-216ENST00000511859 MDH1BQ5I0G3 518 aa12.26□□□□□ -0.45
RNF4-216ENST00000511859 SNIP1Q8TAD8 396 aaKnown RBP12.26□□□□□ -0.45
RNF4-216ENST00000511859 PRCCQ92733 491 aaPredicted RBP12.26□□□□□ -0.45
RNF4-216ENST00000511859 FGF11Q92914 225 aa12.26□□□□□ -0.45
RNF4-216ENST00000511859 MMS19Q96T76 1030 aa12.26□□□□□ -0.45
RNF4-216ENST00000511859 MTMR12Q9C0I1 747 aa12.26□□□□□ -0.45
RNF4-216ENST00000511859 NACA2Q9H009 215 aa12.26□□□□□ -0.45
RNF4-216ENST00000511859 UPF2Q9HAU5 1272 aaKnown RBP12.26□□□□□ -0.45
RNF4-216ENST00000511859 COMMD8Q9NX08 183 aa12.26□□□□□ -0.45
RNF4-216ENST00000511859 GMIPQ9P107 970 aa12.26□□□□□ -0.45
RNF4-216ENST00000511859 FTSJ1Q9UET6 329 aa12.26□□□□□ -0.45
RNF4-216ENST00000511859 FBXO10Q9UK96 956 aa12.26□□□□□ -0.45
RNF4-216ENST00000511859 ANKRD6Q9Y2G4 727 aa12.26□□□□□ -0.45
RNF4-216ENST00000511859 SNX11Q9Y5W9 270 aa12.26□□□□□ -0.45
RNF4-216ENST00000511859 PIEZO2Q9H5I5 2752 aa12.26□□□□□ -0.45
RNF4-216ENST00000511859 COL12A1Q99715 3063 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 ARHGAP6O43182 974 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 PAPSS1O43252 624 aaPredicted RBP12.25□□□□□ -0.45
RNF4-216ENST00000511859 SYNCRIPO60506 623 aaKnown RBP12.25□□□□□ -0.45
RNF4-216ENST00000511859 EIF5BO60841 1220 aaKnown RBP12.25□□□□□ -0.45
RNF4-216ENST00000511859 PPP1R37O75864 691 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 PTPN1P18031 435 aaKnown RBP12.25□□□□□ -0.45
RNF4-216ENST00000511859 GRIA4P48058 902 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 CCT8P50990 548 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 ENPP2Q13822 863 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 MCM6Q14566 821 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 PCSK4Q6UW60 755 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 CCDC83Q8IWF9 413 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 KRI1Q8N9T8 703 aaKnown RBP12.25□□□□□ -0.45
RNF4-216ENST00000511859 RAD54LQ92698 747 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 SAAL1Q96ER3 474 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 STRA6Q9BX79 667 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 IKZF4Q9H2S9 585 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 SNX25Q9H3E2 840 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 CCSER2Q9H7U1 834 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 PDE11AQ9HCR9 933 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 BLOC1S4Q9NUP1 217 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 IL37Q9NZH6 218 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 THAP10Q9P2Z0 257 aaPredicted RBP12.25□□□□□ -0.45
RNF4-216ENST00000511859 LIMCH1Q9UPQ0 1083 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 CKAP5Q14008 2032 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 PTPN13Q12923 2485 aa12.25□□□□□ -0.45
RNF4-216ENST00000511859 ARID1BQ8NFD5 2236 aaPredicted RBP12.25□□□□□ -0.45
RNF4-216ENST00000511859 FAM92AA1XBS5 289 aa12.24□□□□□ -0.45
RNF4-216ENST00000511859 GREM1O60565 184 aa12.24□□□□□ -0.45
RNF4-216ENST00000511859 TACC1O75410 805 aa12.24□□□□□ -0.45
RNF4-216ENST00000511859 TNNC2P02585 160 aa12.24□□□□□ -0.45
RNF4-216ENST00000511859 ZDHHC11BP0C7U3 371 aa12.24□□□□□ -0.45
RNF4-216ENST00000511859 IRF1P10914 325 aa12.24□□□□□ -0.45
RNF4-216ENST00000511859 ACO1P21399 889 aaKnown RBP12.24□□□□□ -0.45
RNF4-216ENST00000511859 DDIT3P35638 169 aa12.24□□□□□ -0.45
RNF4-216ENST00000511859 CACNA2D1P54289 1103 aa12.24□□□□□ -0.45
RNF4-216ENST00000511859 SURF1Q15526 300 aa12.24□□□□□ -0.45
RNF4-216ENST00000511859 DUOXA2Q1HG44 320 aa12.24□□□□□ -0.45
RNF4-216ENST00000511859 TAF1BQ53T94 588 aaPredicted RBP12.24□□□□□ -0.45
RNF4-216ENST00000511859 TPGS1Q6ZTW0 290 aa12.24□□□□□ -0.45
RNF4-216ENST00000511859 ZSWIM2Q8NEG5 633 aa12.24□□□□□ -0.45
RNF4-216ENST00000511859 OR6B3Q8NGW1 331 aa12.24□□□□□ -0.45
RNF4-216ENST00000511859 UCMAQ8WVF2 138 aa12.24□□□□□ -0.45
RNF4-216ENST00000511859 WBP2Q969T9 261 aa12.24□□□□□ -0.45
RNF4-216ENST00000511859 ACCSQ96QU6 501 aa12.24□□□□□ -0.45
RNF4-216ENST00000511859 TMEM30AQ9NV96 361 aa12.24□□□□□ -0.45
RNF4-216ENST00000511859 INTS13Q9NVM9 706 aa12.24□□□□□ -0.45
RNF4-216ENST00000511859 SEL1LQ9UBV2 794 aa12.24□□□□□ -0.45
RNF4-216ENST00000511859 LSM7Q9UK45 103 aaKnown RBP12.24□□□□□ -0.45
RNF4-216ENST00000511859 SLC27A6Q9Y2P4 619 aa12.24□□□□□ -0.45
RNF4-216ENST00000511859 COL5A1P20908 1838 aaPredicted RBP12.24□□□□□ -0.45
RNF4-216ENST00000511859 IL12RB1P42701 662 aa12.23□□□□□ -0.45
RNF4-216ENST00000511859 RHDQ02161 417 aa12.23□□□□□ -0.45
RNF4-216ENST00000511859 GOLGA8FQ08AF8 430 aa12.23□□□□□ -0.45
RNF4-216ENST00000511859 KCNA1Q09470 495 aa12.23□□□□□ -0.45
RNF4-216ENST00000511859 GOLGA8DPQ0D2H9 430 aa12.23□□□□□ -0.45
RNF4-216ENST00000511859 TARDBPQ13148 414 aaKnown RBP eCLIP12.23□□□□□ -0.45
RNF4-216ENST00000511859 L1TD1Q5T7N2 865 aaKnown RBP12.23□□□□□ -0.45
RNF4-216ENST00000511859 SCAMP5Q8TAC9 235 aa12.23□□□□□ -0.45
RNF4-216ENST00000511859 LARP4BQ92615 738 aaKnown RBP12.23□□□□□ -0.45
RNF4-216ENST00000511859 TMEM176AQ96HP8 235 aa12.23□□□□□ -0.45
RNF4-216ENST00000511859 KLF16Q9BXK1 252 aaPredicted RBP12.23□□□□□ -0.45
RNF4-216ENST00000511859 ZNF518BQ9C0D4 1074 aa12.23□□□□□ -0.45
RNF4-216ENST00000511859 MRPL44Q9H9J2 332 aaKnown RBP12.23□□□□□ -0.45
RNF4-216ENST00000511859 PCDHB13Q9Y5F0 798 aa12.23□□□□□ -0.45
RNF4-216ENST00000511859 GOLGA8IPA6NC78 632 aa12.22□□□□□ -0.45
RNF4-216ENST00000511859 GOLGA8JA6NMD2 632 aa12.22□□□□□ -0.45
RNF4-216ENST00000511859 B8ZZF3 427 aa12.22□□□□□ -0.45
RNF4-216ENST00000511859 H0Y8X5 98 aa12.22□□□□□ -0.45
RNF4-216ENST00000511859 KCNK3O14649 394 aa12.22□□□□□ -0.45
RNF4-216ENST00000511859 ENC1O14682 589 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms