RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 K7ESF4 209 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 M0QYV0 167 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 PIK3R2O00459 728 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 MED7O43513 233 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 HOXC13P31276 330 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 USP8P40818 1118 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 MESP2Q0VG99 397 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 NCAPHQ15003 741 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 MEA1Q16626 185 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 FBXO43Q4G163 708 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 KLHDC7AQ5VTJ3 777 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 TMEM110Q86TL2 294 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 MIB1Q86YT6 1006 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 SIX6OS1Q8N1H7 587 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 IRGQQ8WZA9 623 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 PNKPQ96T60 521 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 FAM126AQ9BYI3 521 aaPredicted RBP16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 VPS16Q9H269 839 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 ABCC13Q9NSE7 274 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 TAB2Q9NYJ8 693 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 MARCH2Q9P0N8 246 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 EP300Q09472 2414 aaPredicted RBP16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 PATJQ8NI35 1801 aa16.91■□□□□ 0.3
PDLIM5-216ENST00000511767 LILRB5O75023 590 aa16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 ATG13O75143 517 aa16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 RNF40O75150 1001 aa16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 ADH1CP00326 375 aa16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 FYNP06241 537 aa16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 ADH5P11766 374 aa16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 HOXA6P31267 233 aa16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 EIF2DP41214 584 aaKnown RBP16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 GOLGA8FQ08AF8 430 aa16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 GOLGA8DPQ0D2H9 430 aa16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 KRT31Q15323 416 aa16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 STX1AQ16623 288 aa16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 ASCL5Q7RTU5 278 aa16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 C12orf40Q86WS4 652 aa16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 ETFBKMTQ8IXQ9 262 aa16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 FAM71AQ8IYT1 594 aa16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 NAT16Q8N8M0 369 aa16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 EDEM1Q92611 657 aa16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 NKD2Q969F2 451 aaPredicted RBP16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 NAA15Q9BXJ9 866 aaKnown RBP16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 CYTH4Q9UIA0 394 aa16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 RASAL2Q9UJF2 1139 aa16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 LSM7Q9UK45 103 aaKnown RBP16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 WDR87Q6ZQQ6 2873 aa16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 HELZP42694 1942 aaKnown RBP16.9■□□□□ 0.3
PDLIM5-216ENST00000511767 FAM186AA6NE01 2351 aa16.89■□□□□ 0.3
PDLIM5-216ENST00000511767 MYO15AQ9UKN7 3530 aa16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 VPS13AQ96RL7 3174 aa16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 SLC12A8A0AV02 714 aa16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 HOXC11O43248 304 aaPredicted RBP16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 THAP12O43422 761 aa16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 HMBSP08397 361 aa16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 GNA15P30679 374 aa16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 PTK2Q05397 1052 aa16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 DRAP1Q14919 205 aaPredicted RBP16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 RSRC2Q7L4I2 434 aaKnown RBP16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 PHTF2Q8N3S3 785 aa16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 CLEC4CQ8WTT0 213 aa16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 ATRIPQ8WXE1 791 aa16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 P2RY11Q96G91 374 aa16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 DCLK3Q9C098 648 aa16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 HSD3B7Q9H2F3 369 aa16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 POLR3BQ9NW08 1133 aaPredicted RBP16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 WDR35Q9P2L0 1181 aa16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 LIMA1Q9UHB6 759 aaKnown RBP16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 SFMBT1Q9UHJ3 866 aa16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 ZNF510Q9Y2H8 683 aa16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 PCDHGA2Q9Y5H1 932 aa16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 GPR179Q6PRD1 2367 aa16.89■□□□□ 0.29
PDLIM5-216ENST00000511767 PRR23AA6NEV1 266 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 GFRA3O60609 400 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 FBXO21O94952 628 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 KAT7O95251 611 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 CHRM1P11229 460 aaPredicted RBP16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 GRIA2P42262 883 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 ACADSBP45954 432 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 NRLP54845 237 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 TYRO3Q06418 890 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 DMWDQ09019 674 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 PPP2R5DQ14738 602 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 TRIP4Q15650 581 aaPredicted RBP16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 ANO4Q32M45 955 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 EMC10Q5UCC4 262 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 SLC47A2Q86VL8 602 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 FMNL3Q8IVF7 1028 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 SFTPA1Q8IWL2 248 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 SUMF1Q8NBK3 374 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 USP33Q8TEY7 942 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 RNF139Q8WU17 664 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 STK33Q9BYT3 514 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 MIS12Q9H081 205 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 LHX5Q9H2C1 402 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 PLCB1Q9NQ66 1216 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 OLA1Q9NTK5 396 aaKnown RBP16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 MARK1Q9P0L2 795 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 FBXO10Q9UK96 956 aa16.88■□□□□ 0.29
PDLIM5-216ENST00000511767 AGO1Q9UL18 857 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms