RNA–Protein interactions for RNA: ENST00000511669.1

CXCL3-204, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CXCL3, Length 1,641 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-204ENST00000511669 TLCD1Q96CP7 247 aa17.14■□□□□ 0.33
CXCL3-204ENST00000511669 NPY6RQ99463 290 aa17.14■□□□□ 0.33
CXCL3-204ENST00000511669 ULBP1Q9BZM6 244 aa17.14■□□□□ 0.33
CXCL3-204ENST00000511669 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.14■□□□□ 0.33
CXCL3-204ENST00000511669 ADAM7Q9H2U9 754 aa17.14■□□□□ 0.33
CXCL3-204ENST00000511669 ELAC1Q9H777 363 aaKnown RBP17.14■□□□□ 0.33
CXCL3-204ENST00000511669 NRDE2Q9H7Z3 1164 aa17.14■□□□□ 0.33
CXCL3-204ENST00000511669 CSNK1G1Q9HCP0 422 aa17.14■□□□□ 0.33
CXCL3-204ENST00000511669 SAYSD1Q9NPB0 183 aa17.14■□□□□ 0.33
CXCL3-204ENST00000511669 TMEM161AQ9NX61 479 aa17.14■□□□□ 0.33
CXCL3-204ENST00000511669 FZD10Q9ULW2 581 aa17.14■□□□□ 0.33
CXCL3-204ENST00000511669 TSC2P49815 1807 aa17.14■□□□□ 0.33
CXCL3-204ENST00000511669 BCLAF3A2AJT9 711 aaKnown RBP17.13■□□□□ 0.33
CXCL3-204ENST00000511669 HACD1B0YJ81 288 aa17.13■□□□□ 0.33
CXCL3-204ENST00000511669 M0QYT0 321 aa17.13■□□□□ 0.33
CXCL3-204ENST00000511669 DNM1LO00429 736 aa17.13■□□□□ 0.33
CXCL3-204ENST00000511669 HOXA2O43364 376 aa17.13■□□□□ 0.33
CXCL3-204ENST00000511669 LTFP02788 710 aa17.13■□□□□ 0.33
CXCL3-204ENST00000511669 SHBGP04278 402 aa17.13■□□□□ 0.33
CXCL3-204ENST00000511669 PECAM1P16284 738 aaPredicted RBP17.13■□□□□ 0.33
CXCL3-204ENST00000511669 YWHAHQ04917 246 aaPredicted RBP17.13■□□□□ 0.33
CXCL3-204ENST00000511669 HIF1AQ16665 826 aa17.13■□□□□ 0.33
CXCL3-204ENST00000511669 KCTD19Q17RG1 926 aaPredicted RBP17.13■□□□□ 0.33
CXCL3-204ENST00000511669 ZC3H18Q86VM9 953 aaKnown RBP17.13■□□□□ 0.33
CXCL3-204ENST00000511669 DCP1BQ8IZD4 617 aaKnown RBP17.13■□□□□ 0.33
CXCL3-204ENST00000511669 APBB2Q92870 758 aa17.13■□□□□ 0.33
CXCL3-204ENST00000511669 NT5C3BQ969T7 300 aa17.13■□□□□ 0.33
CXCL3-204ENST00000511669 SMOQ99835 787 aa17.13■□□□□ 0.33
CXCL3-204ENST00000511669 GPATCH2LQ9NWQ4 482 aa17.13■□□□□ 0.33
CXCL3-204ENST00000511669 NINJ2Q9NZG7 142 aa17.13■□□□□ 0.33
CXCL3-204ENST00000511669 SAE1Q9UBE0 346 aaPredicted RBP17.13■□□□□ 0.33
CXCL3-204ENST00000511669 CACNG4Q9UBN1 327 aa17.13■□□□□ 0.33
CXCL3-204ENST00000511669 HEY1Q9Y5J3 304 aa17.13■□□□□ 0.33
CXCL3-204ENST00000511669 STK10O94804 968 aaKnown RBP17.12■□□□□ 0.33
CXCL3-204ENST00000511669 ZSCAN5DPP0CG00 497 aa17.12■□□□□ 0.33
CXCL3-204ENST00000511669 TSHRP16473 764 aa17.12■□□□□ 0.33
CXCL3-204ENST00000511669 RPL22P35268 128 aaKnown RBP17.12■□□□□ 0.33
CXCL3-204ENST00000511669 MDH1P40925 334 aaKnown RBP17.12■□□□□ 0.33
CXCL3-204ENST00000511669 BRCC3P46736 316 aa17.12■□□□□ 0.33
CXCL3-204ENST00000511669 VEGFBP49765 207 aa17.12■□□□□ 0.33
CXCL3-204ENST00000511669 ATP1A2P50993 1020 aa17.12■□□□□ 0.33
CXCL3-204ENST00000511669 KYNUQ16719 465 aa17.12■□□□□ 0.33
CXCL3-204ENST00000511669 SKIDA1Q1XH10 827 aa17.12■□□□□ 0.33
CXCL3-204ENST00000511669 KIAA0319Q5VV43 1072 aa17.12■□□□□ 0.33
CXCL3-204ENST00000511669 SPATA2LQ8IUW3 424 aaPredicted RBP17.12■□□□□ 0.33
CXCL3-204ENST00000511669 PDIK1LQ8N165 341 aa17.12■□□□□ 0.33
CXCL3-204ENST00000511669 FAM71DQ8N9W8 422 aa17.12■□□□□ 0.33
CXCL3-204ENST00000511669 PCDH19Q8TAB3 1148 aa17.12■□□□□ 0.33
CXCL3-204ENST00000511669 PRCCQ92733 491 aaPredicted RBP17.12■□□□□ 0.33
CXCL3-204ENST00000511669 KLC2Q9H0B6 622 aa17.12■□□□□ 0.33
CXCL3-204ENST00000511669 SF3B1O75533 1304 aaKnown RBP eCLIP17.12■□□□□ 0.33
CXCL3-204ENST00000511669 BEST1O76090 585 aa17.11■□□□□ 0.33
CXCL3-204ENST00000511669 PARNO95453 639 aaKnown RBP17.11■□□□□ 0.33
CXCL3-204ENST00000511669 ETS1P14921 441 aa17.11■□□□□ 0.33
CXCL3-204ENST00000511669 IRAK1P51617 712 aa17.11■□□□□ 0.33
CXCL3-204ENST00000511669 BASP1P80723 227 aaKnown RBP17.11■□□□□ 0.33
CXCL3-204ENST00000511669 NR1H3Q13133 447 aa17.11■□□□□ 0.33
CXCL3-204ENST00000511669 BEND5Q7L4P6 421 aa17.11■□□□□ 0.33
CXCL3-204ENST00000511669 UNC45BQ8IWX7 931 aa17.11■□□□□ 0.33
CXCL3-204ENST00000511669 ZNF296Q8WUU4 475 aaPredicted RBP17.11■□□□□ 0.33
CXCL3-204ENST00000511669 SEPT8Q92599 483 aa17.11■□□□□ 0.33
CXCL3-204ENST00000511669 NTAN1Q96AB6 310 aa17.11■□□□□ 0.33
CXCL3-204ENST00000511669 RTP4Q96DX8 246 aa17.11■□□□□ 0.33
CXCL3-204ENST00000511669 PGAP3Q96FM1 320 aaPredicted RBP17.11■□□□□ 0.33
CXCL3-204ENST00000511669 PAAF1Q9BRP4 392 aa17.11■□□□□ 0.33
CXCL3-204ENST00000511669 LRFN2Q9ULH4 789 aa17.11■□□□□ 0.33
CXCL3-204ENST00000511669 FARP1Q9Y4F1 1045 aaPredicted RBP17.11■□□□□ 0.33
CXCL3-204ENST00000511669 RAD54BQ9Y620 910 aa17.11■□□□□ 0.33
CXCL3-204ENST00000511669 SMIM23A6NLE4 172 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 PITPNM1O00562 1244 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 CHADO15335 359 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 KCNN4O15554 427 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 CDH16O75309 829 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 IL4RP24394 825 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 PAN2Q504Q3 1202 aaKnown RBP17.1■□□□□ 0.33
CXCL3-204ENST00000511669 TRAF7Q6Q0C0 670 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 FAM131BQ86XD5 332 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 PQLC3Q8N755 202 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 GLIS1Q8NBF1 620 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 UHMK1Q8TAS1 419 aaKnown RBP17.1■□□□□ 0.33
CXCL3-204ENST00000511669 SLC7A14Q8TBB6 771 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 CSPG4P5Q96PW8 444 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 KCTD15Q96SI1 283 aaPredicted RBP17.1■□□□□ 0.33
CXCL3-204ENST00000511669 OSBPL7Q9BZF2 842 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 DNAJC17Q9NVM6 304 aaKnown RBP17.1■□□□□ 0.33
CXCL3-204ENST00000511669 PCDHB7Q9Y5E2 793 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 ERICH4A6NGS2 130 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 ALOX15BO15296 676 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 NCAM1P13591 858 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 DSC1Q08554 894 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 PDIA2Q13087 525 aaKnown RBP17.1■□□□□ 0.33
CXCL3-204ENST00000511669 NFE2Q16621 373 aaPredicted RBP17.1■□□□□ 0.33
CXCL3-204ENST00000511669 ZSCAN26Q16670 478 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 CA9Q16790 459 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 RAB6CQ53S08 254 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 SLC45A4Q5BKX6 768 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 NPNTQ6UXI9 565 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 BNIPLQ7Z465 357 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 CCDC185Q8N715 623 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 NAT8LQ8N9F0 302 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms