RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 ZNF513Q8N8E2 541 aaPredicted RBP7.22□□□□□ -1.25
COPS4-209ENST00000511653 FAM3CQ92520 227 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 KREMEN1Q96MU8 473 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 LRRC3BQ96PB8 259 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 PGLYRP2Q96PD5 576 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 MMTAG2Q9BU76 263 aaKnown RBP7.22□□□□□ -1.25
COPS4-209ENST00000511653 DUSP23Q9BVJ7 150 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 FAM126AQ9BYI3 521 aaPredicted RBP7.22□□□□□ -1.25
COPS4-209ENST00000511653 FOXP1Q9H334 677 aaPredicted RBP7.22□□□□□ -1.25
COPS4-209ENST00000511653 KMT5AQ9NQR1 393 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 ASAH2Q9NR71 780 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 APEX2Q9UBZ4 518 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 LRWD1Q9UFC0 647 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 GMEB2Q9UKD1 530 aa7.22□□□□□ -1.25
COPS4-209ENST00000511653 TIMM13Q9Y5L4 95 aaPredicted RBP7.22□□□□□ -1.25
COPS4-209ENST00000511653 SLC38A8A6NNN8 435 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 PRR5-ARHGAP8B1AHC4 643 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 H7C4K7 107 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 MAN2B1O00754 1011 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 ZNF197O14709 1029 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 PPEF2O14830 753 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 EPHX1P07099 455 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 RPL9P32969 192 aaKnown RBP7.21□□□□□ -1.26
COPS4-209ENST00000511653 FNTBP49356 437 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 CCR3P51677 355 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 CDR1P51861 262 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 ARHGAP8P85298 464 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 NOLC1Q14978 699 aaKnown RBP eCLIP7.21□□□□□ -1.26
COPS4-209ENST00000511653 CYP4A22Q5TCH4 519 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 PRR23BQ6ZRT6 265 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 C1orf186Q6ZWK4 172 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 FAM214BQ7L5A3 538 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 APBB1IPQ7Z5R6 666 aaPredicted RBP7.21□□□□□ -1.26
COPS4-209ENST00000511653 MFSD6LQ8IWD5 586 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 BEST2Q8NFU1 509 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 FBXO18Q8NFZ0 1043 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 TTC8Q8TAM2 541 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 DEPDC1BQ8WUY9 529 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 SECISBP2LQ93073 1101 aaKnown RBP7.21□□□□□ -1.26
COPS4-209ENST00000511653 BORCS6Q96GS4 357 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 ZFYVE19Q96K21 471 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 ZNF512Q96ME7 567 aaPredicted RBP7.21□□□□□ -1.26
COPS4-209ENST00000511653 TCHPQ9BT92 498 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 SLITRK6Q9H5Y7 841 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 TRPV4Q9HBA0 871 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 TRPV5Q9NQA5 729 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 PCDHB6Q9Y5E3 794 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 IGSF10Q6WRI0 2623 aa7.21□□□□□ -1.26
COPS4-209ENST00000511653 GCN1Q92616 2671 aaKnown RBP7.21□□□□□ -1.26
COPS4-209ENST00000511653 HELZP42694 1942 aaKnown RBP7.2□□□□□ -1.26
COPS4-209ENST00000511653 LOC400499M0QZD8 3231 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 MYO18AQ92614 2054 aaKnown RBP7.2□□□□□ -1.26
COPS4-209ENST00000511653 ESYT3A0FGR9 886 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 K7ESF4 209 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 M0QZQ0 153 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 ZNF263O14978 683 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 SOAT2O75908 522 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 PRAMEF12O95522 483 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 ADRB1P08588 477 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 TNFSF9P41273 254 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 AARSP49588 968 aaKnown RBP eCLIP7.2□□□□□ -1.26
COPS4-209ENST00000511653 DUSP4Q13115 394 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 MAP7Q14244 749 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 HEATR6Q6AI08 1181 aaKnown RBP7.2□□□□□ -1.26
COPS4-209ENST00000511653 LAIR1Q6GTX8 287 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 IQCEQ6IPM2 695 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 ELMOD1Q8N336 334 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 TMEM161BQ8NDZ6 487 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 APPL2Q8NEU8 664 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 TMEM209Q96SK2 561 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 RTKNQ9BST9 563 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 GTSE1Q9NYZ3 720 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 ZNF451Q9Y4E5 1061 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 PTPRDP23468 1912 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 MYOFQ9NZM1 2061 aa7.2□□□□□ -1.26
COPS4-209ENST00000511653 THADAQ6YHU6 1953 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 NPHP3-ACAD11A0A0J9YXS1 232 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.19□□□□□ -1.26
COPS4-209ENST00000511653 TTC26A0AVF1 554 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 MTMR11A4FU01 709 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 FAM189A1O60320 539 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 TOM1L1O75674 476 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 OAZ2O95190 189 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 RETP07949 1114 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 FAM87AP0C7U9 286 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 SDHBP21912 280 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 CXCL12P48061 93 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 TRAPPC10P48553 1259 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 YWHAHQ04917 246 aaPredicted RBP7.19□□□□□ -1.26
COPS4-209ENST00000511653 MCL1Q07820 350 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 TNK2Q07912 1038 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 FCHO2Q0JRZ9 810 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 SIM2Q14190 667 aaPredicted RBP7.19□□□□□ -1.26
COPS4-209ENST00000511653 NCAPHQ15003 741 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 ZRSR1Q15695 479 aaKnown RBP7.19□□□□□ -1.26
COPS4-209ENST00000511653 EGFLAMQ63HQ2 1017 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 PKN3Q6P5Z2 889 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 PRR23CQ6ZRP0 262 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 GAREM2Q75VX8 874 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 SPEM1Q8N4L4 309 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms