RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 TTC27Q6P3X3 843 aa15.83■□□□□ 0.13
SCLT1-209ENST00000511426 SCN4BQ8IWT1 228 aa15.83■□□□□ 0.13
SCLT1-209ENST00000511426 CCDC89Q8N998 374 aa15.83■□□□□ 0.13
SCLT1-209ENST00000511426 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.83■□□□□ 0.13
SCLT1-209ENST00000511426 AENQ8WTP8 325 aaKnown RBP15.83■□□□□ 0.13
SCLT1-209ENST00000511426 CAVIN3Q969G5 261 aa15.83■□□□□ 0.13
SCLT1-209ENST00000511426 RNF157Q96PX1 679 aa15.83■□□□□ 0.13
SCLT1-209ENST00000511426 HERPUD2Q9BSE4 406 aa15.83■□□□□ 0.13
SCLT1-209ENST00000511426 CALN1Q9BXU9 219 aa15.83■□□□□ 0.13
SCLT1-209ENST00000511426 PCDH18Q9HCL0 1135 aa15.83■□□□□ 0.13
SCLT1-209ENST00000511426 KLHL11Q9NVR0 708 aa15.83■□□□□ 0.13
SCLT1-209ENST00000511426 AFF4Q9UHB7 1163 aaKnown RBP15.83■□□□□ 0.13
SCLT1-209ENST00000511426 FZD10Q9ULW2 581 aa15.83■□□□□ 0.13
SCLT1-209ENST00000511426 INSL6Q9Y581 213 aa15.83■□□□□ 0.13
SCLT1-209ENST00000511426 PCDHB12Q9Y5F1 795 aa15.83■□□□□ 0.13
SCLT1-209ENST00000511426 CST8O60676 142 aa15.83■□□□□ 0.12
SCLT1-209ENST00000511426 IGLV3-25P01717 112 aa15.83■□□□□ 0.12
SCLT1-209ENST00000511426 URODP06132 367 aa15.83■□□□□ 0.12
SCLT1-209ENST00000511426 KRT10P13645 584 aa15.83■□□□□ 0.12
SCLT1-209ENST00000511426 ARL4AP40617 200 aa15.83■□□□□ 0.12
SCLT1-209ENST00000511426 YWHAGP61981 247 aaKnown RBP eCLIP15.83■□□□□ 0.12
SCLT1-209ENST00000511426 BYSLQ13895 437 aaKnown RBP15.83■□□□□ 0.12
SCLT1-209ENST00000511426 EFHC2Q5JST6 749 aa15.83■□□□□ 0.12
SCLT1-209ENST00000511426 BRMS1LQ5PSV4 323 aa15.83■□□□□ 0.12
SCLT1-209ENST00000511426 OTUD1Q5VV17 481 aaPredicted RBP15.83■□□□□ 0.12
SCLT1-209ENST00000511426 SYPL2Q5VXT5 272 aa15.83■□□□□ 0.12
SCLT1-209ENST00000511426 KAZNQ674X7 775 aa15.83■□□□□ 0.12
SCLT1-209ENST00000511426 SLC9A4Q6AI14 798 aa15.83■□□□□ 0.12
SCLT1-209ENST00000511426 DENND5BQ6ZUT9 1274 aa15.83■□□□□ 0.12
SCLT1-209ENST00000511426 BBOF1Q8ND07 529 aa15.83■□□□□ 0.12
SCLT1-209ENST00000511426 SLC35B2Q8TB61 432 aa15.83■□□□□ 0.12
SCLT1-209ENST00000511426 C1orf54Q8WWF1 131 aa15.83■□□□□ 0.12
SCLT1-209ENST00000511426 RIN2Q8WYP3 895 aaPredicted RBP15.83■□□□□ 0.12
SCLT1-209ENST00000511426 PKNOX2Q96KN3 472 aa15.83■□□□□ 0.12
SCLT1-209ENST00000511426 HTATIP2Q9BUP3 242 aa15.83■□□□□ 0.12
SCLT1-209ENST00000511426 CLIC5Q9NZA1 410 aa15.83■□□□□ 0.12
SCLT1-209ENST00000511426 NAALADL1Q9UQQ1 740 aa15.83■□□□□ 0.12
SCLT1-209ENST00000511426 CDY1Q9Y6F8 540 aa15.83■□□□□ 0.12
SCLT1-209ENST00000511426 MRPL42Q9Y6G3 142 aaKnown RBP15.83■□□□□ 0.12
SCLT1-209ENST00000511426 ACRP10323 421 aa15.82■□□□□ 0.12
SCLT1-209ENST00000511426 HTR7P34969 479 aa15.82■□□□□ 0.12
SCLT1-209ENST00000511426 PBX3P40426 434 aa15.82■□□□□ 0.12
SCLT1-209ENST00000511426 NR2C2P49116 596 aa15.82■□□□□ 0.12
SCLT1-209ENST00000511426 VCPP55072 806 aaKnown RBP15.82■□□□□ 0.12
SCLT1-209ENST00000511426 ROR1Q01973 937 aa15.82■□□□□ 0.12
SCLT1-209ENST00000511426 KRT17Q04695 432 aa15.82■□□□□ 0.12
SCLT1-209ENST00000511426 PTK6Q13882 451 aa15.82■□□□□ 0.12
SCLT1-209ENST00000511426 PPP1R7Q15435 360 aa15.82■□□□□ 0.12
SCLT1-209ENST00000511426 ACBD5Q5T8D3 534 aaPredicted RBP15.82■□□□□ 0.12
SCLT1-209ENST00000511426 BTBD8Q5XKL5 378 aa15.82■□□□□ 0.12
SCLT1-209ENST00000511426 MSANTD2Q6P1R3 559 aa15.82■□□□□ 0.12
SCLT1-209ENST00000511426 HFE2Q6ZVN8 426 aa15.82■□□□□ 0.12
SCLT1-209ENST00000511426 BZW1Q7L1Q6 419 aaKnown RBP15.82■□□□□ 0.12
SCLT1-209ENST00000511426 OTOP2Q7RTS6 562 aa15.82■□□□□ 0.12
SCLT1-209ENST00000511426 HDXQ7Z353 690 aa15.82■□□□□ 0.12
SCLT1-209ENST00000511426 ANKS1BQ7Z6G8 1248 aa15.82■□□□□ 0.12
SCLT1-209ENST00000511426 RFX6Q8HWS3 928 aa15.82■□□□□ 0.12
SCLT1-209ENST00000511426 SLC7A14Q8TBB6 771 aa15.82■□□□□ 0.12
SCLT1-209ENST00000511426 HERVK_113Q902F9 699 aa15.82■□□□□ 0.12
SCLT1-209ENST00000511426 CLP1Q92989 425 aaKnown RBP15.82■□□□□ 0.12
SCLT1-209ENST00000511426 SMOC2Q9H3U7 446 aa15.82■□□□□ 0.12
SCLT1-209ENST00000511426 VIPAS39Q9H9C1 493 aa15.82■□□□□ 0.12
SCLT1-209ENST00000511426 OLA1Q9NTK5 396 aaKnown RBP15.82■□□□□ 0.12
SCLT1-209ENST00000511426 FNIP2Q9P278 1114 aa15.82■□□□□ 0.12
SCLT1-209ENST00000511426 APOL1O14791 398 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 YWHAQP27348 245 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 L1CAMP32004 1257 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 HCAR3P49019 387 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 CXCR3P49682 368 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 CAV1Q03135 178 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 EIF4EBP2Q13542 120 aaPredicted RBP15.81■□□□□ 0.12
SCLT1-209ENST00000511426 OASLQ15646 514 aaKnown RBP15.81■□□□□ 0.12
SCLT1-209ENST00000511426 MGAT5BQ3V5L5 792 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 ANKRD20A8PQ5CZ79 823 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 ZNF365Q70YC5 407 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 FIBCD1Q8N539 461 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 ZNF276Q8N554 614 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 ATAD1Q8NBU5 361 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 ZNF461Q8TAF7 563 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 SP7Q8TDD2 431 aaPredicted RBP15.81■□□□□ 0.12
SCLT1-209ENST00000511426 CASKIN2Q8WXE0 1202 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 OVCA2Q8WZ82 227 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 BADQ92934 168 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 ACSF2Q96CM8 615 aaPredicted RBP15.81■□□□□ 0.12
SCLT1-209ENST00000511426 SERPINB11Q96P15 392 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 CDK5RAP1Q96SZ6 601 aaKnown RBP15.81■□□□□ 0.12
SCLT1-209ENST00000511426 TTLL2Q9BWV7 592 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 VN1R3Q9BXE9 311 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 TSPYL1Q9H0U9 437 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 DHX35Q9H5Z1 703 aaKnown RBP15.81■□□□□ 0.12
SCLT1-209ENST00000511426 FAM204AQ9H8W3 233 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 WDR6Q9NNW5 1121 aaKnown RBP15.81■□□□□ 0.12
SCLT1-209ENST00000511426 DDIT4Q9NX09 232 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 FBXW11Q9UKB1 542 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 RWDD3Q9Y3V2 267 aa15.81■□□□□ 0.12
SCLT1-209ENST00000511426 ZBBXA8MT70 800 aa15.8■□□□□ 0.12
SCLT1-209ENST00000511426 H3BRJ5 948 aa15.8■□□□□ 0.12
SCLT1-209ENST00000511426 MCF2LO15068 1137 aa15.8■□□□□ 0.12
SCLT1-209ENST00000511426 ABLIM3O94929 683 aa15.8■□□□□ 0.12
SCLT1-209ENST00000511426 CD48P09326 243 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms