RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 PDK2Q15119 407 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 ERMARDQ5T6L9 678 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 WDR93Q6P2C0 686 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 BEND5Q7L4P6 421 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 BNIPLQ7Z465 357 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 FAM131BQ86XD5 332 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 STKLD1Q8NE28 680 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 C1orf54Q8WWF1 131 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 CLP1Q92989 425 aaKnown RBP13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 SPATA17Q96L03 361 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 CLSTN3Q9BQT9 956 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 FAM204AQ9H8W3 233 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 MRPL17Q9NRX2 175 aaKnown RBP13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 HOMER3Q9NSC5 361 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 GPATCH2LQ9NWQ4 482 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 CALCOCO1Q9P1Z2 691 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 AFF4Q9UHB7 1163 aaKnown RBP13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 DMGDHQ9UI17 866 aaKnown RBP13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 AP4E1Q9UPM8 1137 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 SCML2Q9UQR0 700 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 EFR3BQ9Y2G0 817 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 TNRC18O15417 2968 aaPredicted RBP13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 NLRC5Q86WI3 1866 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 RTN3O95197 1032 aaPredicted RBP13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 DNAJB2P25686 324 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 COILP38432 576 aaPredicted RBP13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 ARSEP51690 589 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 DR1Q01658 176 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 CREMQ03060 361 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 DHX34Q14147 1143 aaKnown RBP13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 TAZQ16635 292 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 ZC3H12AQ5D1E8 599 aaKnown RBP13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 BTBD8Q5XKL5 378 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 TPGS2Q68CL5 300 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 DENND5BQ6ZUT9 1274 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 RFX6Q8HWS3 928 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 CCDC105Q8IYK2 499 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 ARHGAP18Q8N392 663 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 ADAM32Q8TC27 787 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 SP7Q8TDD2 431 aaPredicted RBP13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 GPR152Q8TDT2 470 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 ATG4AQ8WYN0 398 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 DPF3Q92784 378 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 PGAP3Q96FM1 320 aaPredicted RBP13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 DCLK3Q9C098 648 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 PLEKHA4Q9H4M7 779 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 LRRC19Q9H756 370 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 ABCC13Q9NSE7 274 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 PIGVQ9NUD9 493 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 ZNF446Q9NWS9 450 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 DDIT4Q9NX09 232 aa13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 R3HDM2Q9Y2K5 976 aaKnown RBP13.13□□□□□ -0.31
LYSMD3-204ENST00000509384 ALPK3Q96L96 1907 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 A0A1W2PQH9 124 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 FAM187AA6NFU0 413 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 CCDC85CA6NKD9 419 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 TTI1O43156 1089 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 ZMYND10O75800 440 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 F9P00740 461 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 LINC00271P0C7V0 271 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 YWHAQP27348 245 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 TUFMP49411 452 aaKnown RBP13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 GUCY2DQ02846 1103 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 ADCY2Q08462 1091 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 GPS2Q13227 327 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 DPYSL3Q14195 570 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 DPYSL2Q16555 572 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 CA9Q16790 459 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 TTC27Q6P3X3 843 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 CCDC137Q6PK04 289 aaKnown RBP13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 SND1Q7KZF4 910 aaKnown RBP eCLIP13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 SCD5Q86SK9 330 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 TAC4Q86UU9 113 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 MON1AQ86VX9 555 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 VSIG1Q86XK7 387 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 PSTKQ8IV42 348 aaKnown RBP13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 GPR65Q8IYL9 337 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 CCDC185Q8N715 623 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 DQX1Q8TE96 717 aaKnown RBP13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 FBXO32Q969P5 355 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 ZNF670Q9BS34 389 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 MAK16Q9BXY0 300 aaKnown RBP13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 DHX35Q9H5Z1 703 aaKnown RBP13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 PCDH18Q9HCL0 1135 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 COMMD8Q9NX08 183 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 GMIPQ9P107 970 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 PCYOX1Q9UHG3 505 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 RASAL2Q9UJF2 1139 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 FZD10Q9ULW2 581 aa13.12□□□□□ -0.31
LYSMD3-204ENST00000509384 CST8O60676 142 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 CA8P35219 290 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 CTNNB1P35222 781 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 USP46P62068 366 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 DYNLT1P63172 113 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 SNX1Q13596 522 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 TFDP2Q14188 446 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 CCNG2Q16589 344 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 PPP6R3Q5H9R7 873 aaPredicted RBP13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 EFHC2Q5JST6 749 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms