RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 ZSCAN32Q9NX65 697 aa16.92■□□□□ 0.3
PDLIM5-212ENST00000509333 ANTXRLA6NF34 631 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 CHURC1-FNTBB4DL54 471 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 K7ESF4 209 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 M0QYV0 167 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 PIK3R2O00459 728 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 MED7O43513 233 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 HOXC13P31276 330 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 USP8P40818 1118 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 MESP2Q0VG99 397 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 NCAPHQ15003 741 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 MEA1Q16626 185 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 FBXO43Q4G163 708 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 KLHDC7AQ5VTJ3 777 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 TMEM110Q86TL2 294 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 MIB1Q86YT6 1006 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 SIX6OS1Q8N1H7 587 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 IRGQQ8WZA9 623 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 PNKPQ96T60 521 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 FAM126AQ9BYI3 521 aaPredicted RBP16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 VPS16Q9H269 839 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 ABCC13Q9NSE7 274 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 TAB2Q9NYJ8 693 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 MARCH2Q9P0N8 246 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 EP300Q09472 2414 aaPredicted RBP16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 PATJQ8NI35 1801 aa16.91■□□□□ 0.3
PDLIM5-212ENST00000509333 LILRB5O75023 590 aa16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 ATG13O75143 517 aa16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 RNF40O75150 1001 aa16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 ADH1CP00326 375 aa16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 FYNP06241 537 aa16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 ADH5P11766 374 aa16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 HOXA6P31267 233 aa16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 EIF2DP41214 584 aaKnown RBP16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 GOLGA8FQ08AF8 430 aa16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 GOLGA8DPQ0D2H9 430 aa16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 KRT31Q15323 416 aa16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 STX1AQ16623 288 aa16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 ASCL5Q7RTU5 278 aa16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 C12orf40Q86WS4 652 aa16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 ETFBKMTQ8IXQ9 262 aa16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 FAM71AQ8IYT1 594 aa16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 NAT16Q8N8M0 369 aa16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 EDEM1Q92611 657 aa16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 NKD2Q969F2 451 aaPredicted RBP16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 NAA15Q9BXJ9 866 aaKnown RBP16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 CYTH4Q9UIA0 394 aa16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 RASAL2Q9UJF2 1139 aa16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 LSM7Q9UK45 103 aaKnown RBP16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 WDR87Q6ZQQ6 2873 aa16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 HELZP42694 1942 aaKnown RBP16.9■□□□□ 0.3
PDLIM5-212ENST00000509333 FAM186AA6NE01 2351 aa16.89■□□□□ 0.3
PDLIM5-212ENST00000509333 MYO15AQ9UKN7 3530 aa16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 VPS13AQ96RL7 3174 aa16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 SLC12A8A0AV02 714 aa16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 HOXC11O43248 304 aaPredicted RBP16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 THAP12O43422 761 aa16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 HMBSP08397 361 aa16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 GNA15P30679 374 aa16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 PTK2Q05397 1052 aa16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 DRAP1Q14919 205 aaPredicted RBP16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 RSRC2Q7L4I2 434 aaKnown RBP16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 PHTF2Q8N3S3 785 aa16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 CLEC4CQ8WTT0 213 aa16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 ATRIPQ8WXE1 791 aa16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 P2RY11Q96G91 374 aa16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 DCLK3Q9C098 648 aa16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 HSD3B7Q9H2F3 369 aa16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 POLR3BQ9NW08 1133 aaPredicted RBP16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 WDR35Q9P2L0 1181 aa16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 LIMA1Q9UHB6 759 aaKnown RBP16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 SFMBT1Q9UHJ3 866 aa16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 ZNF510Q9Y2H8 683 aa16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 PCDHGA2Q9Y5H1 932 aa16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 GPR179Q6PRD1 2367 aa16.89■□□□□ 0.29
PDLIM5-212ENST00000509333 PRR23AA6NEV1 266 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 GFRA3O60609 400 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 FBXO21O94952 628 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 KAT7O95251 611 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 CHRM1P11229 460 aaPredicted RBP16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 GRIA2P42262 883 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 ACADSBP45954 432 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 NRLP54845 237 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 TYRO3Q06418 890 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 DMWDQ09019 674 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 PPP2R5DQ14738 602 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 TRIP4Q15650 581 aaPredicted RBP16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 ANO4Q32M45 955 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 EMC10Q5UCC4 262 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 SLC47A2Q86VL8 602 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 FMNL3Q8IVF7 1028 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 SFTPA1Q8IWL2 248 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 SUMF1Q8NBK3 374 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 USP33Q8TEY7 942 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 RNF139Q8WU17 664 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 STK33Q9BYT3 514 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 MIS12Q9H081 205 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 LHX5Q9H2C1 402 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 PLCB1Q9NQ66 1216 aa16.88■□□□□ 0.29
PDLIM5-212ENST00000509333 OLA1Q9NTK5 396 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms