RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 SYCP1Q15431 976 aa19.05■□□□□ 0.64
CLDND1-220ENST00000508902 LY6G5CQ5SRR4 150 aa19.05■□□□□ 0.64
CLDND1-220ENST00000508902 BSPRYQ5W0U4 402 aa19.05■□□□□ 0.64
CLDND1-220ENST00000508902 HTR3DQ70Z44 454 aa19.05■□□□□ 0.64
CLDND1-220ENST00000508902 DDX42Q86XP3 938 aaKnown RBP eCLIP19.05■□□□□ 0.64
CLDND1-220ENST00000508902 PHTF2Q8N3S3 785 aa19.05■□□□□ 0.64
CLDND1-220ENST00000508902 FAM81BQ96LP2 452 aa19.05■□□□□ 0.64
CLDND1-220ENST00000508902 NELL2Q99435 816 aa19.05■□□□□ 0.64
CLDND1-220ENST00000508902 POLR3BQ9NW08 1133 aaPredicted RBP19.05■□□□□ 0.64
CLDND1-220ENST00000508902 DNMT3LQ9UJW3 386 aa19.05■□□□□ 0.64
CLDND1-220ENST00000508902 PCDHGC3Q9UN70 934 aa19.05■□□□□ 0.64
CLDND1-220ENST00000508902 MYO18AQ92614 2054 aaKnown RBP19.04■□□□□ 0.64
CLDND1-220ENST00000508902 FAM170AA1A519 330 aa19.04■□□□□ 0.64
CLDND1-220ENST00000508902 NFATC1O95644 943 aa19.04■□□□□ 0.64
CLDND1-220ENST00000508902 SLC6A11P48066 632 aa19.04■□□□□ 0.64
CLDND1-220ENST00000508902 PTPN5P54829 565 aa19.04■□□□□ 0.64
CLDND1-220ENST00000508902 SLC8A3P57103 927 aa19.04■□□□□ 0.64
CLDND1-220ENST00000508902 NOP9Q86U38 636 aaKnown RBP19.04■□□□□ 0.64
CLDND1-220ENST00000508902 TMEM25Q86YD3 366 aa19.04■□□□□ 0.64
CLDND1-220ENST00000508902 C1orf210Q8IVY1 113 aa19.04■□□□□ 0.64
CLDND1-220ENST00000508902 SIX6OS1Q8N1H7 587 aa19.04■□□□□ 0.64
CLDND1-220ENST00000508902 C1orf131Q8NDD1 294 aaKnown RBP19.04■□□□□ 0.64
CLDND1-220ENST00000508902 CPXM1Q96SM3 734 aa19.04■□□□□ 0.64
CLDND1-220ENST00000508902 NACA2Q9H009 215 aa19.04■□□□□ 0.64
CLDND1-220ENST00000508902 MIS12Q9H081 205 aa19.04■□□□□ 0.64
CLDND1-220ENST00000508902 PRMT8Q9NR22 394 aaPredicted RBP19.04■□□□□ 0.64
CLDND1-220ENST00000508902 FAM207AQ9NSI2 230 aaPredicted RBP19.04■□□□□ 0.64
CLDND1-220ENST00000508902 SFMBT1Q9UHJ3 866 aa19.04■□□□□ 0.64
CLDND1-220ENST00000508902 MRPS17Q9Y2R5 130 aaKnown RBP19.04■□□□□ 0.64
CLDND1-220ENST00000508902 SH3BP1Q9Y3L3 701 aa19.04■□□□□ 0.64
CLDND1-220ENST00000508902 TRIM24O15164 1050 aa19.03■□□□□ 0.64
CLDND1-220ENST00000508902 MSI1O43347 362 aaKnown RBP19.03■□□□□ 0.64
CLDND1-220ENST00000508902 HMBSP08397 361 aa19.03■□□□□ 0.64
CLDND1-220ENST00000508902 RALAP11233 206 aa19.03■□□□□ 0.64
CLDND1-220ENST00000508902 PLA2G5P39877 138 aa19.03■□□□□ 0.64
CLDND1-220ENST00000508902 ZNF165P49910 485 aa19.03■□□□□ 0.64
CLDND1-220ENST00000508902 TAF5Q15542 800 aa19.03■□□□□ 0.64
CLDND1-220ENST00000508902 ZSCAN23Q3MJ62 389 aa19.03■□□□□ 0.64
CLDND1-220ENST00000508902 PTPN20Q4JDL3 420 aa19.03■□□□□ 0.64
CLDND1-220ENST00000508902 MSANTD2Q6P1R3 559 aa19.03■□□□□ 0.64
CLDND1-220ENST00000508902 TSSK4Q6SA08 328 aa19.03■□□□□ 0.64
CLDND1-220ENST00000508902 TMEM110Q86TL2 294 aa19.03■□□□□ 0.64
CLDND1-220ENST00000508902 SCUBE3Q8IX30 993 aa19.03■□□□□ 0.64
CLDND1-220ENST00000508902 ETFBKMTQ8IXQ9 262 aa19.03■□□□□ 0.64
CLDND1-220ENST00000508902 EPS8L1Q8TE68 723 aa19.03■□□□□ 0.64
CLDND1-220ENST00000508902 ERGIC2Q96RQ1 377 aa19.03■□□□□ 0.64
CLDND1-220ENST00000508902 STK33Q9BYT3 514 aa19.03■□□□□ 0.64
CLDND1-220ENST00000508902 CBX8Q9HC52 389 aa19.03■□□□□ 0.64
CLDND1-220ENST00000508902 MARCH2Q9P0N8 246 aa19.03■□□□□ 0.64
CLDND1-220ENST00000508902 EML5Q05BV3 1969 aa19.02■□□□□ 0.64
CLDND1-220ENST00000508902 LTFP02788 710 aa19.02■□□□□ 0.64
CLDND1-220ENST00000508902 CYP11B1P15538 503 aa19.02■□□□□ 0.64
CLDND1-220ENST00000508902 POLR2FP61218 127 aaKnown RBP19.02■□□□□ 0.64
CLDND1-220ENST00000508902 PITX1P78337 314 aaPredicted RBP19.02■□□□□ 0.64
CLDND1-220ENST00000508902 SATB1Q01826 763 aa19.02■□□□□ 0.64
CLDND1-220ENST00000508902 ARHGAP18Q8N392 663 aa19.02■□□□□ 0.64
CLDND1-220ENST00000508902 OLIG1Q8TAK6 271 aa19.02■□□□□ 0.64
CLDND1-220ENST00000508902 STK32AQ8WU08 396 aa19.02■□□□□ 0.64
CLDND1-220ENST00000508902 SLC20A1Q8WUM9 679 aa19.02■□□□□ 0.64
CLDND1-220ENST00000508902 IRGQQ8WZA9 623 aa19.02■□□□□ 0.64
CLDND1-220ENST00000508902 NAP1L5Q96NT1 182 aaPredicted RBP19.02■□□□□ 0.64
CLDND1-220ENST00000508902 PRRX2Q99811 253 aa19.02■□□□□ 0.64
CLDND1-220ENST00000508902 P2RY13Q9BPV8 354 aa19.02■□□□□ 0.64
CLDND1-220ENST00000508902 NLRC4Q9NPP4 1024 aa19.02■□□□□ 0.64
CLDND1-220ENST00000508902 SPATA6Q9NWH7 488 aaPredicted RBP19.02■□□□□ 0.64
CLDND1-220ENST00000508902 NOCTQ9UK39 431 aaKnown RBP19.02■□□□□ 0.64
CLDND1-220ENST00000508902 SLC12A8A0AV02 714 aa19.01■□□□□ 0.63
CLDND1-220ENST00000508902 HOXC11O43248 304 aaPredicted RBP19.01■□□□□ 0.63
CLDND1-220ENST00000508902 MED7O43513 233 aa19.01■□□□□ 0.63
CLDND1-220ENST00000508902 ERBB2P04626 1255 aa19.01■□□□□ 0.63
CLDND1-220ENST00000508902 SP9P0CG40 484 aa19.01■□□□□ 0.63
CLDND1-220ENST00000508902 ADH5P11766 374 aa19.01■□□□□ 0.63
CLDND1-220ENST00000508902 CHRNB2P17787 502 aa19.01■□□□□ 0.63
CLDND1-220ENST00000508902 MAGEA9P43362 315 aa19.01■□□□□ 0.63
CLDND1-220ENST00000508902 TRIP4Q15650 581 aaPredicted RBP19.01■□□□□ 0.63
CLDND1-220ENST00000508902 BTBD8Q5XKL5 378 aa19.01■□□□□ 0.63
CLDND1-220ENST00000508902 SMYD5Q6GMV2 418 aa19.01■□□□□ 0.63
CLDND1-220ENST00000508902 C1orf228Q6PIY5 440 aa19.01■□□□□ 0.63
CLDND1-220ENST00000508902 LUZP1Q86V48 1076 aa19.01■□□□□ 0.63
CLDND1-220ENST00000508902 FMNL3Q8IVF7 1028 aa19.01■□□□□ 0.63
CLDND1-220ENST00000508902 CD101Q93033 1021 aa19.01■□□□□ 0.63
CLDND1-220ENST00000508902 LHX5Q9H2C1 402 aa19.01■□□□□ 0.63
CLDND1-220ENST00000508902 SPHK2Q9NRA0 654 aa19.01■□□□□ 0.63
CLDND1-220ENST00000508902 ST7Q9NRC1 585 aa19.01■□□□□ 0.63
CLDND1-220ENST00000508902 TBC1D14Q9P2M4 693 aa19.01■□□□□ 0.63
CLDND1-220ENST00000508902 AGO1Q9UL18 857 aaKnown RBP19.01■□□□□ 0.63
CLDND1-220ENST00000508902 HCN2Q9UL51 889 aa19.01■□□□□ 0.63
CLDND1-220ENST00000508902 RIF1Q5UIP0 2472 aaKnown RBP19.01■□□□□ 0.63
CLDND1-220ENST00000508902 OTOGLQ3ZCN5 2332 aa19■□□□□ 0.63
CLDND1-220ENST00000508902 K7EQS6 105 aa19■□□□□ 0.63
CLDND1-220ENST00000508902 GFRA2O00451 464 aa19■□□□□ 0.63
CLDND1-220ENST00000508902 SLC9A3R1O14745 358 aaPredicted RBP19■□□□□ 0.63
CLDND1-220ENST00000508902 FBXO21O94952 628 aa19■□□□□ 0.63
CLDND1-220ENST00000508902 IGLV3-27P01718 113 aa19■□□□□ 0.63
CLDND1-220ENST00000508902 CORO1AP31146 461 aaKnown RBP19■□□□□ 0.63
CLDND1-220ENST00000508902 CDH5P33151 784 aaPredicted RBP19■□□□□ 0.63
CLDND1-220ENST00000508902 UBXN1Q04323 297 aa19■□□□□ 0.63
CLDND1-220ENST00000508902 PTK2Q05397 1052 aa19■□□□□ 0.63
CLDND1-220ENST00000508902 DMWDQ09019 674 aa19■□□□□ 0.63
CLDND1-220ENST00000508902 FKBP15Q5T1M5 1219 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms