RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 CHERPQ8IWX8 916 aaKnown RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 POGLUT1Q8NBL1 392 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 DNAAF1Q8NEP3 725 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 TTLL11Q8NHH1 800 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 SELENOMQ8WWX9 145 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 LPIN2Q92539 896 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 MAP4K1Q92918 833 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 DPCDQ9BVM2 203 aaPredicted RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 PRDM9Q9NQV7 894 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 CNGB3Q9NQW8 809 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 ASH2LQ9UBL3 628 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 CTNNAL1Q9UBT7 734 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 FAM198AQ9UFP1 575 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 PLA2G4CQ9UP65 541 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 CARD8Q9Y2G2 431 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 ZBTB1Q9Y2K1 713 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 SPACA6W5XKT8 324 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 MYO5AQ9Y4I1 1855 aaKnown RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 TTC24A2A3L6 582 aaPredicted RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 WRBO00258 174 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 CACNB4O00305 520 aaPredicted RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 RNF113AO15541 343 aaKnown RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 GABBR2O75899 941 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 NPTXRO95502 500 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 ADH1AP07327 375 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 COL6A2P12110 1019 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 ETS2P15036 469 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 NRG3P56975 720 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 CYP4F8P98187 520 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 CREB5Q02930 508 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 CALCOCO2Q13137 446 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 ITPK1Q13572 414 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 ZYXQ15942 572 aaKnown RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 BTBD16Q32M84 506 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 STRIP1Q5VSL9 837 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 TMC6Q7Z403 805 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 ARFGAP2Q8N6H7 521 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 TMEM145Q8NBT3 493 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 AKR7LQ8NHP1 331 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 TEKT4Q8WW24 435 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 EAF2Q96CJ1 260 aaPredicted RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 CYFIP2Q96F07 1278 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 CUEDC2Q9H467 287 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 XKR8Q9H6D3 395 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 ERVMER34-1Q9H9K5 563 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 MRPL40Q9NQ50 206 aaKnown RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 INTS13Q9NVM9 706 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 MPP6Q9NZW5 540 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 HEY2Q9UBP5 337 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 LHX6Q9UPM6 363 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.07□□□□□ -1.76
NEDD4-209ENST00000508871 FAM169AQ9Y6X4 670 aa4.07□□□□□ -1.76
NEDD4-209ENST00000508871 GOLGA8IPA6NC78 632 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 TMEM232C9JQI7 657 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 NDST3O95803 873 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 CAPN3P20807 821 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 CD40P25942 277 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 RPA1P27694 616 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 ALDH4A1P30038 563 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 GRK4P32298 578 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 GP5P40197 560 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 PMS2P54278 862 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 ODF1Q14990 250 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 MDH1BQ5I0G3 518 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 MAMDC2Q7Z304 686 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 BNIPLQ7Z465 357 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 ZC3H18Q86VM9 953 aaKnown RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 DPP10Q8N608 796 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 STYXQ8WUJ0 223 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 DCAF4Q8WV16 495 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 CENPIQ92674 756 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 FBXO32Q969P5 355 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 DCLRE1CQ96SD1 692 aaKnown RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 KCNF1Q9H3M0 494 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 POFUT1Q9H488 388 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 EHD1Q9H4M9 534 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 STN1Q9H668 368 aaKnown RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 TIMMDC1Q9NPL8 285 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 PCDHA5Q9Y5H7 936 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 COPG1Q9Y678 874 aaKnown RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 SALL1Q9NSC2 1324 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 FIGNL2A6NMB9 653 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 PSMD3O43242 534 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 ZNF208O43345 1280 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 TMIGD3P0DMS9 266 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 XRCC6P12956 609 aaKnown RBP eCLIP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 CPB1P15086 417 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 GRM5P41594 1212 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 RXRGP48443 463 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 PCP4P48539 62 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 DIO1P49895 249 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 PRAMEP78395 509 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 ZNF200P98182 395 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 DHX34Q14147 1143 aaKnown RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 ALG11Q2TAA5 492 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 FAM160B1Q5W0V3 765 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 KCNT2Q6UVM3 1135 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 FRMD7Q6ZUT3 714 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 STXBP4Q6ZWJ1 553 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 ZER1Q7Z7L7 766 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms