RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 ATP2A2P16615 1042 aaKnown RBP5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 ATF7P17544 494 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 NR2F2P24468 414 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 ADSSP30520 456 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 HOXC12P31275 282 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 PSMC2P35998 433 aaKnown RBP5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 AP3M2P53677 418 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 EPHB4P54760 987 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 HTRA4P83105 476 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 MAP4K2Q12851 820 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 SHHQ15465 462 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 RAB30Q15771 203 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 ADGRF1Q5T601 910 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 YOD1Q5VVQ6 348 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 EEF1DP3Q658K8 133 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 ANKRD40Q6AI12 368 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 SLC39A4Q6P5W5 647 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 ALKAL1Q6UXT8 129 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 ZNF662Q6ZS27 426 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 INTS8Q75QN2 995 aaKnown RBP5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 HERC6Q8IVU3 1022 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 FAM114A1Q8IWE2 563 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 BRSK2Q8IWQ3 736 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 KREMEN2Q8NCW0 462 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 NUP43Q8NFH3 380 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 URGCPQ8TCY9 931 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 FRS2Q8WU20 508 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 CACTINQ8WUQ7 758 aaKnown RBP5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 NELFBQ8WX92 580 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 ERCC4Q92889 916 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 ZNF689Q96CS4 500 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 ZBTB45Q96K62 511 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 SAMD11Q96NU1 681 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 RPS6KC1Q96S38 1066 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 CDC6Q99741 560 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 IER2Q9BTL4 223 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 SGPP1Q9BX95 441 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 SLC38A7Q9NVC3 462 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 CPSF3Q9UKF6 684 aaKnown RBP5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 PLA2G2DQ9UNK4 145 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 PLAAQ9Y263 795 aa5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 PDCD11Q14690 1871 aaKnown RBP5.92□□□□□ -1.46
HMGB1P44-201ENST00000508597 RANBP2P49792 3224 aaKnown RBP5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 TTC26A0AVF1 554 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 ANKRD62A6NC57 917 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 ARL5CA6NH57 179 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 IKBKBO14920 756 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 CLIC2O15247 247 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 PRODHO43272 600 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 STX10O60499 249 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 OFD1O75665 1012 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 RECQL4O94761 1208 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 ASMTLO95671 621 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 CPP00450 1065 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 THP07101 528 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 C8AP07357 584 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 EPB41P11171 864 aaKnown RBP5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 KRT13P13646 458 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 PNLIPP16233 465 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 CYP3A5P20815 502 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 TACR1P25103 407 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 GTF2H1P32780 548 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 RPL9P32969 192 aaKnown RBP5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 DEFB103AP81534 67 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 SMAD3P84022 425 aaKnown RBP5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 GRIK3Q13003 919 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 LAPTM5Q13571 262 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 PSMD6Q15008 389 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 SNRNP35Q16560 246 aaKnown RBP5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 TPD52L1Q16890 204 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 TCTN1Q2MV58 587 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 DPCR1Q3MIW9 517 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 ZSCAN23Q3MJ62 389 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 LRIT3Q3SXY7 679 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 NOMO2Q5JPE7 1267 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 FAM209AQ5JX71 171 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 C9orf50Q5SZB4 431 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 SPATA1Q5VX52 437 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 HLA-DQA1Q5Y7H0 255 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 ISM2Q6H9L7 571 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 TTI2Q6NXR4 508 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 GALNT18Q6P9A2 607 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 CRELD2Q6UXH1 353 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 FRMD5Q7Z6J6 570 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 ZNF605Q86T29 641 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 CDR2LQ86X02 465 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 CCDC103Q8IW40 242 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 THNSL1Q8IYQ7 743 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 LRRC43Q8N309 656 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 CSGALNACT2Q8N6G5 542 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 KCTD13Q8WZ19 329 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 C1orf159Q96HA4 380 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 SNX27Q96L92 541 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 UROC1Q96N76 676 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 FAM193BQ96PV7 902 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 FNBP1Q96RU3 617 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 YME1L1Q96TA2 773 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 CBWD1Q9BRT8 395 aa5.91□□□□□ -1.46
HMGB1P44-201ENST00000508597 FAM213AQ9BRX8 229 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms