RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 SYT10Q6XYQ8 523 aa8.49□□□□□ -1.05
SCN1A-207ENST00000507401 MMS22LQ6ZRQ5 1243 aa8.49□□□□□ -1.05
SCN1A-207ENST00000507401 LUZP1Q86V48 1076 aa8.49□□□□□ -1.05
SCN1A-207ENST00000507401 FMR1NBQ8N0W7 255 aaPredicted RBP8.49□□□□□ -1.05
SCN1A-207ENST00000507401 ADSSL1Q8N142 457 aa8.49□□□□□ -1.05
SCN1A-207ENST00000507401 NUP93Q8N1F7 819 aa8.49□□□□□ -1.05
SCN1A-207ENST00000507401 ENGASEQ8NFI3 743 aa8.49□□□□□ -1.05
SCN1A-207ENST00000507401 OSCP1Q8WVF1 389 aa8.49□□□□□ -1.05
SCN1A-207ENST00000507401 OVCA2Q8WZ82 227 aa8.49□□□□□ -1.05
SCN1A-207ENST00000507401 GSDMAQ96QA5 445 aa8.49□□□□□ -1.05
SCN1A-207ENST00000507401 B3GNT5Q9BYG0 378 aa8.49□□□□□ -1.05
SCN1A-207ENST00000507401 SMG9Q9H0W8 520 aaKnown RBP8.49□□□□□ -1.05
SCN1A-207ENST00000507401 GOLPH3LQ9H4A5 285 aa8.49□□□□□ -1.05
SCN1A-207ENST00000507401 GDPD2Q9HCC8 539 aa8.49□□□□□ -1.05
SCN1A-207ENST00000507401 DONSONQ9NYP3 566 aa8.49□□□□□ -1.05
SCN1A-207ENST00000507401 IL37Q9NZH6 218 aa8.49□□□□□ -1.05
SCN1A-207ENST00000507401 ARHGAP26Q9UNA1 814 aa8.49□□□□□ -1.05
SCN1A-207ENST00000507401 CCL26Q9Y258 94 aa8.49□□□□□ -1.05
SCN1A-207ENST00000507401 CEP83Q9Y592 693 aa8.49□□□□□ -1.05
SCN1A-207ENST00000507401 R4GN57 208 aa8.49□□□□□ -1.05
SCN1A-207ENST00000507401 COL4A3Q01955 1670 aa8.49□□□□□ -1.05
SCN1A-207ENST00000507401 ATXN2Q99700 1313 aaKnown RBP8.49□□□□□ -1.05
SCN1A-207ENST00000507401 ANAPC1Q9H1A4 1944 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 A0A087WUV0 522 aaPredicted RBP8.48□□□□□ -1.05
SCN1A-207ENST00000507401 ZNF840PA6NDX5 716 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 F8VP50 259 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 ATG13O75143 517 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 CKMP06732 381 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 TDGF1P13385 188 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 KRT13P13646 458 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 YWHAQP27348 245 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 CNR2P34972 360 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 CORO7P57737 925 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 SLC7A9P82251 487 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 TNK2Q07912 1038 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 LRMPQ12912 555 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 NR1H3Q13133 447 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 GAS6Q14393 721 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 MTF1Q14872 753 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 CCDC142Q17RM4 750 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 ZCWPW2Q504Y3 356 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 HSP90B2PQ58FF3 399 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 TMEM196Q5HYL7 178 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 SNX30Q5VWJ9 437 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 TXNDC11Q6PKC3 985 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 PAQR9Q6ZVX9 377 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 HDXQ7Z353 690 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 FAM186BQ8IYM0 893 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 TTC39CQ8N584 583 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 ARL14EPQ8N8R7 260 aaPredicted RBP8.48□□□□□ -1.05
SCN1A-207ENST00000507401 SUMF1Q8NBK3 374 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 PDZD8Q8NEN9 1154 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 SPATA20Q8TB22 786 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 RUBCNQ92622 972 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 GOLGA1Q92805 767 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 PPP1R13BQ96KQ4 1090 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 SLITRK1Q96PX8 696 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 SLC22A12Q96S37 553 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 ARHGAP9Q9BRR9 750 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 DNAI2Q9GZS0 605 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 DPEP3Q9H4B8 488 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 EBF3Q9H4W6 596 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 FAM124BQ9H5Z6 455 aaPredicted RBP8.48□□□□□ -1.05
SCN1A-207ENST00000507401 CYP3A43Q9HB55 503 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 HPS4Q9NQG7 708 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 HOOK1Q9UJC3 728 aaKnown RBP8.48□□□□□ -1.05
SCN1A-207ENST00000507401 MAPK8IP1Q9UQF2 711 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 ATP8B3O60423 1300 aa8.48□□□□□ -1.05
SCN1A-207ENST00000507401 KIF26AQ9ULI4 1882 aaPredicted RBP8.47□□□□□ -1.05
SCN1A-207ENST00000507401 CFAP54Q96N23 3096 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 CCDC163A0A0D9SF12 145 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 FAM92AA1XBS5 289 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 C2orf78A6NCI8 922 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 OTOL1A6NHN0 477 aaPredicted RBP8.47□□□□□ -1.05
SCN1A-207ENST00000507401 TMCO5BA8MYB1 307 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 SLC9A3R1O14745 358 aaPredicted RBP8.47□□□□□ -1.05
SCN1A-207ENST00000507401 TERTO14746 1132 aaKnown RBP8.47□□□□□ -1.05
SCN1A-207ENST00000507401 TNFRSF10BO14763 440 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 CETN3O15182 167 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 STX10O60499 249 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 WFS1O76024 890 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 OLFM2O95897 454 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 HLA-DRAP01903 254 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 DRD1P21728 446 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 OAS2P29728 719 aaKnown RBP8.47□□□□□ -1.05
SCN1A-207ENST00000507401 SOX9P48436 509 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 PPP3CAQ08209 521 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 INCA1Q0VD86 236 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 GRSF1Q12849 480 aaKnown RBP eCLIP8.47□□□□□ -1.05
SCN1A-207ENST00000507401 TAF10Q12962 218 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 PON2Q15165 354 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 ZNF77Q15935 545 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 ERCC6LQ2NKX8 1250 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 EML3Q32P44 896 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 FBXO43Q4G163 708 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 ZNF658Q5TYW1 1059 aaPredicted RBP8.47□□□□□ -1.05
SCN1A-207ENST00000507401 KRT39Q6A163 491 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 VASH1Q7L8A9 365 aaPredicted RBP8.47□□□□□ -1.05
SCN1A-207ENST00000507401 ADGRG2Q8IZP9 1017 aa8.47□□□□□ -1.05
SCN1A-207ENST00000507401 FUKQ8N0W3 1084 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms