RNA–Protein interactions for RNA: ENST00000506563.5

CDK7-204, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-204ENST00000506563 TRIM10Q9UDY6 481 aa13.33□□□□□ -0.28
CDK7-204ENST00000506563 SFMBT1Q9UHJ3 866 aa13.33□□□□□ -0.28
CDK7-204ENST00000506563 TMEM59LQ9UK28 342 aa13.33□□□□□ -0.28
CDK7-204ENST00000506563 BRWD1Q9NSI6 2320 aa13.33□□□□□ -0.28
CDK7-204ENST00000506563 TRAV19A0A0A6YYK7 116 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.32□□□□□ -0.28
CDK7-204ENST00000506563 TCRBV5S1A1TA0A578 114 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 MSI1O43347 362 aaKnown RBP13.32□□□□□ -0.28
CDK7-204ENST00000506563 COCHO43405 550 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 BUB1O43683 1085 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 FYNP06241 537 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 CKMP06732 381 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 GLI1P08151 1106 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 IRF1P10914 325 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 PDGFRAP16234 1089 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 TFE3P19532 575 aaPredicted RBP13.32□□□□□ -0.28
CDK7-204ENST00000506563 GPD1P21695 349 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 PSMA2P25787 234 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 SDC4P31431 198 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 SCNN1AP37088 669 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 GSCP56915 257 aaPredicted RBP13.32□□□□□ -0.28
CDK7-204ENST00000506563 PITX1P78337 314 aaPredicted RBP13.32□□□□□ -0.28
CDK7-204ENST00000506563 ATP11AP98196 1134 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 TFF2Q03403 129 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 KIF5AQ12840 1032 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 SMAD4Q13485 552 aaKnown RBP13.32□□□□□ -0.28
CDK7-204ENST00000506563 C15orf59Q2T9L4 293 aaPredicted RBP13.32□□□□□ -0.28
CDK7-204ENST00000506563 PPP1R15BQ5SWA1 713 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 TRNP1Q6NT89 227 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 TADA2BQ86TJ2 420 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 TXLNBQ8N3L3 684 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 KHSRPQ92945 711 aaKnown RBP eCLIP13.32□□□□□ -0.281e-7■□□□□ 11.1
CDK7-204ENST00000506563 ZSWIM3Q96MP5 696 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 SLC2A13Q96QE2 648 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 SLC22A12Q96S37 553 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 TRIM62Q9BVG3 475 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 SLC46A2Q9BY10 475 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 LACRTQ9GZZ8 138 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 LZTFL1Q9NQ48 299 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 TRMT1Q9NXH9 659 aaKnown RBP13.32□□□□□ -0.28
CDK7-204ENST00000506563 CLIC5Q9NZA1 410 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 ANAPC7Q9UJX3 599 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 INTUQ9ULD6 942 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 COG5Q9UP83 839 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 PPP2R2CQ9Y2T4 447 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 DUSP10Q9Y6W6 482 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 ANAPC1Q9H1A4 1944 aa13.32□□□□□ -0.28
CDK7-204ENST00000506563 MACROD2A1Z1Q3 448 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 MBTPS2O43462 519 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 PAPLNO95428 1278 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 OAS1P00973 400 aaKnown RBP13.31□□□□□ -0.28
CDK7-204ENST00000506563 HDCP19113 662 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 ATP5C1P36542 298 aaKnown RBP13.31□□□□□ -0.28
CDK7-204ENST00000506563 AVPR1AP37288 418 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 MATKP42679 507 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 OGDHQ02218 1023 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 NME3Q13232 169 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 TAC4Q86UU9 113 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 NPAS3Q8IXF0 933 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 DQX1Q8TE96 717 aaKnown RBP13.31□□□□□ -0.28
CDK7-204ENST00000506563 RFFLQ8WZ73 363 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 FGF13Q92913 245 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 CDK5RAP1Q96SZ6 601 aaKnown RBP13.31□□□□□ -0.28
CDK7-204ENST00000506563 TBCBQ99426 244 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 RNF38Q9H0F5 515 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 TASP1Q9H6P5 420 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 OLA1Q9NTK5 396 aaKnown RBP13.31□□□□□ -0.28
CDK7-204ENST00000506563 DDIT4Q9NX09 232 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 MARCH2Q9P0N8 246 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 DNMT3LQ9UJW3 386 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 STAP1Q9ULZ2 295 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 GUCA1BQ9UMX6 200 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 USTQ9Y2C2 406 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 PAXBP1Q9Y5B6 917 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 DENND4CQ5VZ89 1909 aa13.31□□□□□ -0.28
CDK7-204ENST00000506563 SLC12A8A0AV02 714 aa13.3□□□□□ -0.28
CDK7-204ENST00000506563 TMEM191CA6NGB0 347 aa13.3□□□□□ -0.28
CDK7-204ENST00000506563 C2CD4BA6NLJ0 364 aa13.3□□□□□ -0.28
CDK7-204ENST00000506563 M0QYT0 321 aa13.3□□□□□ -0.28
CDK7-204ENST00000506563 SCAMP3O14828 347 aaKnown RBP13.3□□□□□ -0.28
CDK7-204ENST00000506563 CCP110O43303 1012 aa13.3□□□□□ -0.28
CDK7-204ENST00000506563 TRUB2O95900 331 aaKnown RBP13.3□□□□□ -0.28
CDK7-204ENST00000506563 DDX6P26196 483 aaKnown RBP eCLIP13.3□□□□□ -0.28
CDK7-204ENST00000506563 NOS2P35228 1153 aa13.3□□□□□ -0.28
CDK7-204ENST00000506563 SSR1P43307 286 aaKnown RBP13.3□□□□□ -0.28
CDK7-204ENST00000506563 TUBP50607 506 aa13.3□□□□□ -0.28
CDK7-204ENST00000506563 MESDQ14696 234 aa13.3□□□□□ -0.28
CDK7-204ENST00000506563 CCDC14Q49A88 953 aa13.3□□□□□ -0.28
CDK7-204ENST00000506563 ARHGAP29Q52LW3 1261 aa13.3□□□□□ -0.28
CDK7-204ENST00000506563 RAB6CQ53S08 254 aa13.3□□□□□ -0.28
CDK7-204ENST00000506563 SH3PXD2AQ5TCZ1 1133 aa13.3□□□□□ -0.28
CDK7-204ENST00000506563 SNX30Q5VWJ9 437 aa13.3□□□□□ -0.28
CDK7-204ENST00000506563 DAB2IPQ5VWQ8 1189 aa13.3□□□□□ -0.28
CDK7-204ENST00000506563 PTCRAQ6ISU1 281 aaPredicted RBP13.3□□□□□ -0.28
CDK7-204ENST00000506563 RHOT2Q8IXI1 618 aa13.3□□□□□ -0.28
CDK7-204ENST00000506563 ZSCAN18Q8TBC5 510 aaPredicted RBP13.3□□□□□ -0.28
CDK7-204ENST00000506563 RNF34Q969K3 372 aa13.3□□□□□ -0.28
CDK7-204ENST00000506563 NECTIN4Q96NY8 510 aa13.3□□□□□ -0.28
CDK7-204ENST00000506563 MYADMQ96S97 322 aa13.3□□□□□ -0.28
CDK7-204ENST00000506563 DDX23Q9BUQ8 820 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms