RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 MAN2B1O00754 1011 aa19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 STC2O76061 302 aa19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 LTFP02788 710 aa19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 CYP17A1P05093 508 aa19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 FYNP06241 537 aa19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 DCNP07585 359 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 MMEP08473 750 aa19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 CDH5P33151 784 aaPredicted RBP19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 GJA4P35212 333 aa19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 STAT1P42224 750 aa19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 FZD5Q13467 585 aa19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 GAB4Q2WGN9 574 aa19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 PTPN20Q4JDL3 420 aa19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 RSRC2Q7L4I2 434 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 RALGPS2Q86X27 583 aaPredicted RBP19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 CPA6Q8N4T0 437 aa19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 FAM3CQ92520 227 aa19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 BAP1Q92560 729 aa19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 MSANTD3Q96H12 275 aa19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 PPP1R13BQ96KQ4 1090 aa19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 ABCC13Q9NSE7 274 aa19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 MARCH2Q9P0N8 246 aa19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 NDRG2Q9UN36 371 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 SIT1Q9Y3P8 196 aa19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 FAM170AA1A519 330 aa19.09■□□□□ 0.65
PDLIM7-216ENST00000506537 FAM170BA6NMN3 283 aa19.09■□□□□ 0.65
PDLIM7-216ENST00000506537 NFATC1O95644 943 aa19.09■□□□□ 0.65
PDLIM7-216ENST00000506537 ERBB2P04626 1255 aa19.09■□□□□ 0.65
PDLIM7-216ENST00000506537 CHRNB2P17787 502 aa19.09■□□□□ 0.65
PDLIM7-216ENST00000506537 MSANTD2Q6P1R3 559 aa19.09■□□□□ 0.65
PDLIM7-216ENST00000506537 Q6ZNB5 142 aa19.09■□□□□ 0.65
PDLIM7-216ENST00000506537 HTR3DQ70Z44 454 aa19.09■□□□□ 0.65
PDLIM7-216ENST00000506537 ADGRG2Q8IZP9 1017 aa19.09■□□□□ 0.65
PDLIM7-216ENST00000506537 OSBPL6Q9BZF3 934 aa19.09■□□□□ 0.65
PDLIM7-216ENST00000506537 TTYH3Q9C0H2 523 aa19.09■□□□□ 0.65
PDLIM7-216ENST00000506537 SLC12A8A0AV02 714 aa19.08■□□□□ 0.64
PDLIM7-216ENST00000506537 SLC9A3R1O14745 358 aaPredicted RBP19.08■□□□□ 0.64
PDLIM7-216ENST00000506537 KLKB1P03952 638 aa19.08■□□□□ 0.64
PDLIM7-216ENST00000506537 HMBSP08397 361 aa19.08■□□□□ 0.64
PDLIM7-216ENST00000506537 PBX1P40424 430 aa19.08■□□□□ 0.64
PDLIM7-216ENST00000506537 FMO1Q01740 532 aa19.08■□□□□ 0.64
PDLIM7-216ENST00000506537 PON2Q15165 354 aa19.08■□□□□ 0.64
PDLIM7-216ENST00000506537 DHCR24Q15392 516 aa19.08■□□□□ 0.64
PDLIM7-216ENST00000506537 TAF5Q15542 800 aa19.08■□□□□ 0.64
PDLIM7-216ENST00000506537 RHBDF2Q6PJF5 856 aa19.08■□□□□ 0.64
PDLIM7-216ENST00000506537 FMNL3Q8IVF7 1028 aa19.08■□□□□ 0.64
PDLIM7-216ENST00000506537 OLA1Q9NTK5 396 aaKnown RBP19.08■□□□□ 0.64
PDLIM7-216ENST00000506537 TBC1D14Q9P2M4 693 aa19.08■□□□□ 0.64
PDLIM7-216ENST00000506537 SFMBT1Q9UHJ3 866 aa19.08■□□□□ 0.64
PDLIM7-216ENST00000506537 MRPS17Q9Y2R5 130 aaKnown RBP19.08■□□□□ 0.64
PDLIM7-216ENST00000506537 MUC6Q6W4X9 2439 aa19.08■□□□□ 0.64
PDLIM7-216ENST00000506537 SART1O43290 800 aaKnown RBP19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 MSI1O43347 362 aaKnown RBP19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 UBASH3AP57075 661 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 ZNF445P59923 1031 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 NOMO3P69849 1222 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 COG7P83436 770 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 CDR2Q01850 454 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 ARID5AQ03989 594 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 GOLGA8FQ08AF8 430 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 GOLGA8DPQ0D2H9 430 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 OLFML1Q6UWY5 402 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 FAM183BPQ6ZVS7 135 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 CACNA2D4Q7Z3S7 1137 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 ZNF677Q86XU0 584 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 TMEM35BQ8NCS4 154 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 RNF214Q8ND24 703 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 RNF139Q8WU17 664 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 CLDN23Q96B33 292 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 FAM149B1Q96BN6 582 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 OTUB2Q96DC9 234 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 NOX5Q96PH1 765 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 PDCL3Q9H2J4 239 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 LSM7Q9UK45 103 aaKnown RBP19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 STRIP2Q9ULQ0 834 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 NAALADL1Q9UQQ1 740 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 CEP83Q9Y592 693 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 MYOFQ9NZM1 2061 aa19.07■□□□□ 0.64
PDLIM7-216ENST00000506537 LSM8O95777 96 aaKnown RBP19.06■□□□□ 0.64
PDLIM7-216ENST00000506537 CHRNB1P11230 501 aa19.06■□□□□ 0.64
PDLIM7-216ENST00000506537 TRIP4Q15650 581 aaPredicted RBP19.06■□□□□ 0.64
PDLIM7-216ENST00000506537 LY6G5CQ5SRR4 150 aa19.06■□□□□ 0.64
PDLIM7-216ENST00000506537 SYPL2Q5VXT5 272 aa19.06■□□□□ 0.64
PDLIM7-216ENST00000506537 C1orf228Q6PIY5 440 aa19.06■□□□□ 0.64
PDLIM7-216ENST00000506537 PRSS33Q8NF86 280 aa19.06■□□□□ 0.64
PDLIM7-216ENST00000506537 OLIG1Q8TAK6 271 aa19.06■□□□□ 0.64
PDLIM7-216ENST00000506537 DQX1Q8TE96 717 aaKnown RBP19.06■□□□□ 0.64
PDLIM7-216ENST00000506537 GOLGA1Q92805 767 aa19.06■□□□□ 0.64
PDLIM7-216ENST00000506537 P2RY11Q96G91 374 aa19.06■□□□□ 0.64
PDLIM7-216ENST00000506537 NELL2Q99435 816 aa19.06■□□□□ 0.64
PDLIM7-216ENST00000506537 FBRSL1Q9HCM7 1045 aaKnown RBP19.06■□□□□ 0.64
PDLIM7-216ENST00000506537 RBM12Q9NTZ6 932 aaKnown RBP19.06■□□□□ 0.64
PDLIM7-216ENST00000506537 IFNKQ9P0W0 207 aa19.06■□□□□ 0.64
PDLIM7-216ENST00000506537 KIAA1549LQ6ZVL6 1849 aa19.05■□□□□ 0.64
PDLIM7-216ENST00000506537 TRDMT1O14717 391 aaKnown RBP19.05■□□□□ 0.64
PDLIM7-216ENST00000506537 CYP1A1P04798 512 aaPredicted RBP19.05■□□□□ 0.64
PDLIM7-216ENST00000506537 NCAM1P13591 858 aa19.05■□□□□ 0.64
PDLIM7-216ENST00000506537 CORO1AP31146 461 aaKnown RBP19.05■□□□□ 0.64
PDLIM7-216ENST00000506537 OPRD1P41143 372 aa19.05■□□□□ 0.64
PDLIM7-216ENST00000506537 CCINQ13939 588 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms