RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 SERTAD3Q9UJW9 196 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 CNTN6Q9UQ52 1028 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 SSX2IPQ9Y2D8 614 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 DERAQ9Y315 318 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 RRP7AQ9Y3A4 280 aaKnown RBP3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 NOX1Q9Y5S8 564 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 DUSP10Q9Y6W6 482 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 EFCAB5A4FU69 1503 aa3.65□□□□□ -1.83
TRAPPC11-205ENST00000506426 COL15A1P39059 1388 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 SCAPERQ9BY12 1400 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 KIF14Q15058 1648 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 HECW1Q76N89 1606 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 B4E171 279 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 ADM5C9JUS6 153 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 DHHO43323 396 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 BAIAP3O94812 1187 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 SCAF4O95104 1147 aaKnown RBP3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 CER1O95813 267 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 TFRCP02786 760 aaKnown RBP3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 CFIP05156 583 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 ELANEP08246 267 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 CNPP09543 421 aaKnown RBP3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 HIBADHP31937 336 aaKnown RBP3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 TSPAN7P41732 249 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 LIFRP42702 1097 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 SCNN1GP51170 649 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 RBM5P52756 815 aaKnown RBP eCLIP3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 SEC24CP53992 1094 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 TIRAPP58753 221 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 CXADRP78310 365 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 FHL3Q13643 280 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 CLCA4Q14CN2 919 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 SMAD1Q15797 465 aaKnown RBP3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 TBC1D10BQ4KMP7 808 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 DEPDC1Q5TB30 811 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 SP5Q6BEB4 398 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 MZT2BQ6NZ67 158 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 MAMDC4Q6UXC1 1216 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 DSTYKQ6XUX3 929 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 C4orf50Q6ZRC1 276 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 Q6ZRM9 215 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 BBS12Q6ZW61 710 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 TRABD2AQ86V40 505 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 RAB11FIP4Q86YS3 637 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 IZUMO1Q8IYV9 350 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 SYNE4Q8N205 404 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 FAM109AQ8N4B1 249 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 ZNF808Q8N4W9 903 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 USP38Q8NB14 1042 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 SYT8Q8NBV8 401 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 TMEM125Q96AQ2 219 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 TWNKQ96RR1 684 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 WDR24Q96S15 920 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 C17orf80Q9BSJ5 609 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 VN1R3Q9BXE9 311 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 PREBQ9HCU5 417 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 PARD6AQ9NPB6 346 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 TMEM160Q9NX00 188 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 STEAP1Q9UHE8 339 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 SORCS3Q9UPU3 1222 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 SLC27A6Q9Y2P4 619 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 CHST2Q9Y4C5 530 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 SNX14Q9Y5W7 946 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 ARHGAP35Q9NRY4 1499 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 ZMYM4Q5VZL5 1548 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 RICTORQ6R327 1708 aa3.64□□□□□ -1.83
TRAPPC11-205ENST00000506426 EEA1Q15075 1411 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 GAGE12BA1L429 117 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 GAGE12HA6NDE8 117 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 KIF28PB7ZC32 967 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 AGPSO00116 658 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 RNASET2O00584 256 aaKnown RBP3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 GPR42O15529 346 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 TSPAN3O60637 253 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 RPP40O75818 363 aaKnown RBP3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 WDR47O94967 919 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 ATP1A3P13637 1013 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 CAPN3P20807 821 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 ACO1P21399 889 aaKnown RBP3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 GATA3P23771 443 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 GSTM5P46439 218 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 CCR5P51681 352 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 SF3A3Q12874 501 aaKnown RBP eCLIP3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 CRHR2Q13324 411 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 PDE1CQ14123 709 aaPredicted RBP3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 ACOX1Q15067 660 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 CYP2A13Q16696 494 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 GEN1Q17RS7 908 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 TBRG1Q3YBR2 411 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 CTXN3Q4LDR2 81 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 HS1BP3Q53T59 392 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 B3GNTL1Q67FW5 361 aaPredicted RBP3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 ARMC6Q6NXE6 501 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 LRRC55Q6ZSA7 311 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 Q6ZSN1 163 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 SYT13Q7L8C5 426 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 LIMS2Q7Z4I7 341 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 TBC1D1Q86TI0 1168 aaPredicted RBP3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 TCP11L2Q8N4U5 519 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 C11orf44Q8N8P7 122 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms