RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 C1QTNF9P0C862 333 aa22.16■■□□□ 1.14
SQSTM1-210ENST00000506042 ZSCAN22P10073 491 aaPredicted RBP22.16■■□□□ 1.14
SQSTM1-210ENST00000506042 ACO1P21399 889 aaKnown RBP22.16■■□□□ 1.14
SQSTM1-210ENST00000506042 ARID5AQ03989 594 aa22.16■■□□□ 1.14
SQSTM1-210ENST00000506042 SEMA3BQ13214 749 aa22.16■■□□□ 1.14
SQSTM1-210ENST00000506042 PAQR9Q6ZVX9 377 aa22.16■■□□□ 1.14
SQSTM1-210ENST00000506042 INTS8Q75QN2 995 aaKnown RBP22.16■■□□□ 1.14
SQSTM1-210ENST00000506042 CYFIP2Q96F07 1278 aa22.16■■□□□ 1.14
SQSTM1-210ENST00000506042 HSPA12BQ96MM6 686 aa22.16■■□□□ 1.14
SQSTM1-210ENST00000506042 SMOQ99835 787 aa22.16■■□□□ 1.14
SQSTM1-210ENST00000506042 KLF16Q9BXK1 252 aaPredicted RBP22.16■■□□□ 1.14
SQSTM1-210ENST00000506042 TMEM74BQ9NUR3 256 aa22.16■■□□□ 1.14
SQSTM1-210ENST00000506042 NAGPAQ9UK23 515 aa22.16■■□□□ 1.14
SQSTM1-210ENST00000506042 STRIP2Q9ULQ0 834 aa22.16■■□□□ 1.14
SQSTM1-210ENST00000506042 SYNCRIPO60506 623 aaKnown RBP22.15■■□□□ 1.14
SQSTM1-210ENST00000506042 PLEKHG6Q3KR16 790 aa22.15■■□□□ 1.14
SQSTM1-210ENST00000506042 KIAA1324Q6UXG2 1013 aaKnown RBP22.15■■□□□ 1.14
SQSTM1-210ENST00000506042 SFTPA1Q8IWL2 248 aa22.15■■□□□ 1.14
SQSTM1-210ENST00000506042 MINDY1Q8N5J2 469 aa22.15■■□□□ 1.14
SQSTM1-210ENST00000506042 GABRG3Q99928 467 aa22.15■■□□□ 1.14
SQSTM1-210ENST00000506042 ZDHHC4Q9NPG8 344 aa22.15■■□□□ 1.14
SQSTM1-210ENST00000506042 DMAC2Q9NW81 257 aa22.15■■□□□ 1.14
SQSTM1-210ENST00000506042 PCDHA7Q9UN72 937 aa22.15■■□□□ 1.14
SQSTM1-210ENST00000506042 CYP8B1Q9UNU6 501 aa22.15■■□□□ 1.14
SQSTM1-210ENST00000506042 CHD8Q9HCK8 2581 aa22.15■■□□□ 1.14
SQSTM1-210ENST00000506042 MYOFQ9NZM1 2061 aa22.15■■□□□ 1.14
SQSTM1-210ENST00000506042 CEP192Q8TEP8 1941 aa22.14■■□□□ 1.14
SQSTM1-210ENST00000506042 IGHV1OR15-9A0A0B4J2B8 117 aa22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 MEI4A8MW99 385 aa22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 STX10O60499 249 aa22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 F13A1P00488 732 aa22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 RARGP13631 454 aa22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 OXTRP30559 389 aa22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 WASP42768 502 aa22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 VAMP7P51809 220 aa22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 ENPEPQ07075 957 aa22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 MESP2Q0VG99 397 aa22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 EGFLAMQ63HQ2 1017 aa22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 SV2AQ7L0J3 742 aa22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 ZNF276Q8N554 614 aa22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 TRIML1Q8N9V2 468 aa22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 SPRYD3Q8NCJ5 442 aa22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 ZCCHC14Q8WYQ9 949 aaKnown RBP22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 JAKMIP2Q96AA8 810 aa22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 FAXDC2Q96IV6 333 aa22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 CLIC5Q9NZA1 410 aa22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 MSRB2Q9Y3D2 182 aa22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 NFE2L3Q9Y4A8 694 aa22.14■■□□□ 1.13
SQSTM1-210ENST00000506042 VNN1O95497 513 aa22.13■■□□□ 1.13
SQSTM1-210ENST00000506042 HLA-DRAP01903 254 aa22.13■■□□□ 1.13
SQSTM1-210ENST00000506042 ACADMP11310 421 aa22.13■■□□□ 1.13
SQSTM1-210ENST00000506042 NDUFV2P19404 249 aa22.13■■□□□ 1.13
SQSTM1-210ENST00000506042 INCA1Q0VD86 236 aa22.13■■□□□ 1.13
SQSTM1-210ENST00000506042 EIF4HQ15056 248 aaKnown RBP22.13■■□□□ 1.13
SQSTM1-210ENST00000506042 FOXD4L5Q5VV16 416 aaPredicted RBP22.13■■□□□ 1.13
SQSTM1-210ENST00000506042 CLEC20AQ6ZU45 233 aa22.13■■□□□ 1.13
SQSTM1-210ENST00000506042 RSRC2Q7L4I2 434 aaKnown RBP22.13■■□□□ 1.13
SQSTM1-210ENST00000506042 CCDC186Q7Z3E2 898 aa22.13■■□□□ 1.13
SQSTM1-210ENST00000506042 FOXD4L4Q8WXT5 416 aaPredicted RBP22.13■■□□□ 1.13
SQSTM1-210ENST00000506042 NIF3L1Q9GZT8 377 aa22.13■■□□□ 1.13
SQSTM1-210ENST00000506042 CAPN10Q9HC96 672 aa22.13■■□□□ 1.13
SQSTM1-210ENST00000506042 A0A1W2PQF6 199 aa22.12■■□□□ 1.13
SQSTM1-210ENST00000506042 CYP26A1O43174 497 aa22.12■■□□□ 1.13
SQSTM1-210ENST00000506042 CASP1P29466 404 aa22.12■■□□□ 1.13
SQSTM1-210ENST00000506042 CD6P30203 668 aa22.12■■□□□ 1.13
SQSTM1-210ENST00000506042 FOXD4L6Q3SYB3 417 aaPredicted RBP22.12■■□□□ 1.13
SQSTM1-210ENST00000506042 KMT5BQ4FZB7 885 aa22.12■■□□□ 1.13
SQSTM1-210ENST00000506042 FOXD4L3Q6VB84 417 aaPredicted RBP22.12■■□□□ 1.13
SQSTM1-210ENST00000506042 PIP4P1Q86T03 277 aa22.12■■□□□ 1.13
SQSTM1-210ENST00000506042 METTL3Q86U44 580 aaKnown RBP22.12■■□□□ 1.13
SQSTM1-210ENST00000506042 FRMD1Q8N878 549 aa22.12■■□□□ 1.13
SQSTM1-210ENST00000506042 C12orf29Q8N999 325 aa22.12■■□□□ 1.13
SQSTM1-210ENST00000506042 ZMIZ2Q8NF64 920 aa22.12■■□□□ 1.13
SQSTM1-210ENST00000506042 GZF1Q9H116 711 aaPredicted RBP22.12■■□□□ 1.13
SQSTM1-210ENST00000506042 SDCBP2Q9H190 292 aa22.12■■□□□ 1.13
SQSTM1-210ENST00000506042 PRDM16Q9HAZ2 1276 aa22.12■■□□□ 1.13
SQSTM1-210ENST00000506042 DNAAF2Q9NVR5 837 aaKnown RBP22.12■■□□□ 1.13
SQSTM1-210ENST00000506042 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.12■■□□□ 1.13
SQSTM1-210ENST00000506042 SERTAD1Q9UHV2 236 aa22.12■■□□□ 1.13
SQSTM1-210ENST00000506042 APOBEC2Q9Y235 224 aaKnown RBP22.12■■□□□ 1.13
SQSTM1-210ENST00000506042 CHRM1P11229 460 aaPredicted RBP22.11■■□□□ 1.13
SQSTM1-210ENST00000506042 NR2F2P24468 414 aa22.11■■□□□ 1.13
SQSTM1-210ENST00000506042 ASPAP45381 313 aa22.11■■□□□ 1.13
SQSTM1-210ENST00000506042 ZNF445P59923 1031 aa22.11■■□□□ 1.13
SQSTM1-210ENST00000506042 STK4Q13043 487 aa22.11■■□□□ 1.13
SQSTM1-210ENST00000506042 KIAA1211LQ6NV74 962 aa22.11■■□□□ 1.13
SQSTM1-210ENST00000506042 IL27RAQ6UWB1 636 aa22.11■■□□□ 1.13
SQSTM1-210ENST00000506042 MIB1Q86YT6 1006 aa22.11■■□□□ 1.13
SQSTM1-210ENST00000506042 DEFB119Q8N690 84 aa22.11■■□□□ 1.13
SQSTM1-210ENST00000506042 SNX21Q969T3 373 aa22.11■■□□□ 1.13
SQSTM1-210ENST00000506042 PAGE5Q96GU1 130 aa22.11■■□□□ 1.13
SQSTM1-210ENST00000506042 ZNF419Q96HQ0 510 aaPredicted RBP22.11■■□□□ 1.13
SQSTM1-210ENST00000506042 TRAF3IP3Q9Y228 551 aa22.11■■□□□ 1.13
SQSTM1-210ENST00000506042 SLC27A6Q9Y2P4 619 aa22.11■■□□□ 1.13
SQSTM1-210ENST00000506042 A0A1B0GTW7 788 aa22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 A0A1W2PQH9 124 aa22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 TIMM44O43615 452 aa22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 BEST1O76090 585 aa22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 TBX18O95935 607 aa22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 SPINK2P20155 84 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms