RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 PARD3BQ8TEW8 1205 aa16.96■□□□□ 0.31
PDLIM7-213ENST00000505074 CCDC47Q96A33 483 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-213ENST00000505074 TNIP3Q96KP6 325 aa16.96■□□□□ 0.31
PDLIM7-213ENST00000505074 CFAP97Q9P2B7 532 aa16.96■□□□□ 0.31
PDLIM7-213ENST00000505074 MYH10P35580 1976 aa16.96■□□□□ 0.31
PDLIM7-213ENST00000505074 IGHV1OR15-9A0A0B4J2B8 117 aa16.95■□□□□ 0.3
PDLIM7-213ENST00000505074 RTN3O95197 1032 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-213ENST00000505074 NR3C1P04150 777 aa16.95■□□□□ 0.3
PDLIM7-213ENST00000505074 ADH5P11766 374 aa16.95■□□□□ 0.3
PDLIM7-213ENST00000505074 KRT85P78386 507 aa16.95■□□□□ 0.3
PDLIM7-213ENST00000505074 SYCP2LQ5T4T6 812 aa16.95■□□□□ 0.3
PDLIM7-213ENST00000505074 RHBDF2Q6PJF5 856 aa16.95■□□□□ 0.3
PDLIM7-213ENST00000505074 FAM35AQ86V20 835 aa16.95■□□□□ 0.3
PDLIM7-213ENST00000505074 C12orf40Q86WS4 652 aa16.95■□□□□ 0.3
PDLIM7-213ENST00000505074 SCUBE3Q8IX30 993 aa16.95■□□□□ 0.3
PDLIM7-213ENST00000505074 ZNF513Q8N8E2 541 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-213ENST00000505074 PDZD8Q8NEN9 1154 aa16.95■□□□□ 0.3
PDLIM7-213ENST00000505074 ZDHHC5Q9C0B5 715 aa16.95■□□□□ 0.3
PDLIM7-213ENST00000505074 RNF38Q9H0F5 515 aa16.95■□□□□ 0.3
PDLIM7-213ENST00000505074 TMEM30AQ9NV96 361 aa16.95■□□□□ 0.3
PDLIM7-213ENST00000505074 PCOLCE2Q9UKZ9 415 aa16.95■□□□□ 0.3
PDLIM7-213ENST00000505074 FRMD4BQ9Y2L6 1034 aa16.95■□□□□ 0.3
PDLIM7-213ENST00000505074 A0A087WV48 116 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 TBC1D3BA6NDS4 549 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 TK2O00142 265 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 CALUO43852 315 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 CBFA2T3O75081 653 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 NDUFS2O75306 463 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 AP1G2O75843 785 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 PRB1P04280 392 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 RPN1P04843 607 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 HOXB2P14652 356 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 PIK3CAP42336 1068 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 DLG4P78352 724 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 SLC7A9P82251 487 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 CYP4F3Q08477 520 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 ORC1Q13415 861 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 PREPLQ4J6C6 727 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 NUDT18Q6ZVK8 323 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 ACOT1Q86TX2 421 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 DDX42Q86XP3 938 aaKnown RBP eCLIP16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 SETD7Q8WTS6 366 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 SMARCD1Q96GM5 515 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 KCNK16Q96T55 309 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 NACA2Q9H009 215 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 DMAP1Q9NPF5 467 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.94■□□□□ 0.36e-7■■■■■ 66.3
PDLIM7-213ENST00000505074 KRT82Q9NSB4 513 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 USP25Q9UHP3 1055 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 ASXL3Q9C0F0 2248 aa16.94■□□□□ 0.3
PDLIM7-213ENST00000505074 PDXKO00764 312 aa16.93■□□□□ 0.3
PDLIM7-213ENST00000505074 KIF20AO95235 890 aa16.93■□□□□ 0.3
PDLIM7-213ENST00000505074 OAS1P00973 400 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-213ENST00000505074 C4BPAP04003 597 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-213ENST00000505074 TRIM21P19474 475 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-213ENST00000505074 CMA1P23946 247 aa16.93■□□□□ 0.3
PDLIM7-213ENST00000505074 SYKP43405 635 aa16.93■□□□□ 0.3
PDLIM7-213ENST00000505074 SLC5A3P53794 718 aa16.93■□□□□ 0.3
PDLIM7-213ENST00000505074 GRIK2Q13002 908 aa16.93■□□□□ 0.3
PDLIM7-213ENST00000505074 SLC39A7Q92504 469 aa16.93■□□□□ 0.3
PDLIM7-213ENST00000505074 FOXJ1Q92949 421 aa16.93■□□□□ 0.3
PDLIM7-213ENST00000505074 ZNF419Q96HQ0 510 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-213ENST00000505074 SDCBP2Q9H190 292 aa16.93■□□□□ 0.3
PDLIM7-213ENST00000505074 KCTD10Q9H3F6 313 aa16.93■□□□□ 0.3
PDLIM7-213ENST00000505074 VRTNQ9H8Y1 702 aa16.93■□□□□ 0.3
PDLIM7-213ENST00000505074 TBC1D14Q9P2M4 693 aa16.93■□□□□ 0.3
PDLIM7-213ENST00000505074 CHORDC1Q9UHD1 332 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-213ENST00000505074 CYP8B1Q9UNU6 501 aa16.93■□□□□ 0.3
PDLIM7-213ENST00000505074 SH3BP1Q9Y3L3 701 aa16.93■□□□□ 0.3
PDLIM7-213ENST00000505074 BPTFQ12830 3046 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 TRABD2BA6NFA1 517 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 VNN1O95497 513 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 IRF1P10914 325 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 CCDC130P13994 396 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 NTSR1P30989 418 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 ABCG1P45844 678 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 GAD2Q05329 585 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 SGSM1Q2NKQ1 1148 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 WDR45BQ5MNZ6 344 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 HECTD3Q5T447 861 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 BTBD8Q5XKL5 378 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 SLC9A9Q8IVB4 645 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 PHTF2Q8N3S3 785 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 GALNT15Q8N3T1 639 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 SCAMP5Q8TAC9 235 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 OVCA2Q8WZ82 227 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 JAKMIP2Q96AA8 810 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 CRELD1Q96HD1 420 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 IMPG2Q9BZV3 1241 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 MMRN2Q9H8L6 949 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 FAM49BQ9NUQ9 324 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 DMAC2Q9NW81 257 aa16.92■□□□□ 0.3
PDLIM7-213ENST00000505074 CELSR3Q9NYQ7 3312 aa16.91■□□□□ 0.3
PDLIM7-213ENST00000505074 COCHO43405 550 aa16.91■□□□□ 0.3
PDLIM7-213ENST00000505074 OLFM2O95897 454 aa16.91■□□□□ 0.3
PDLIM7-213ENST00000505074 MYL1P05976 194 aa16.91■□□□□ 0.3
PDLIM7-213ENST00000505074 PRR29P0C7W0 189 aa16.91■□□□□ 0.3
PDLIM7-213ENST00000505074 ADORA2BP29275 332 aa16.91■□□□□ 0.3
PDLIM7-213ENST00000505074 WASP42768 502 aa16.91■□□□□ 0.3
PDLIM7-213ENST00000505074 NDST1P52848 882 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms