RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 IL18RAPO95256 599 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 CCNYL3P0C7X3 344 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 NCAM1P13591 858 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 JUPP14923 745 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 ACO1P21399 889 aaKnown RBP6.4□□□□□ -1.38
GYPB-204ENST00000504951 ACTN2P35609 894 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 PRPHP41219 470 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 IL12RB1P42701 662 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 GPR15P49685 360 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 LIG4P49917 911 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 CDR1P51861 262 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 ZNF131P52739 623 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 GTF2BQ00403 316 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 LY6G5CQ5SRR4 150 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 KRT79Q5XKE5 535 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 HTR3DQ70Z44 454 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 SPATA2LQ8IUW3 424 aaPredicted RBP6.4□□□□□ -1.38
GYPB-204ENST00000504951 PDCL2Q8N4E4 241 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 DEFB119Q8N690 84 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 TSC1Q92574 1164 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 MED8Q96G25 268 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 TOE1Q96GM8 510 aaKnown RBP6.4□□□□□ -1.38
GYPB-204ENST00000504951 PLIN2Q99541 437 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 HNRNPABQ99729 332 aaKnown RBP6.4□□□□□ -1.38
GYPB-204ENST00000504951 SPHK2Q9NRA0 654 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 COMMD8Q9NX08 183 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 DDX43Q9NXZ2 648 aaKnown RBP6.4□□□□□ -1.38
GYPB-204ENST00000504951 WDR35Q9P2L0 1181 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 GTF3C4Q9UKN8 822 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 CDH9Q9ULB4 789 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 LIMCH1Q9UPQ0 1083 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 SLC27A6Q9Y2P4 619 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 CPQQ9Y646 472 aa6.4□□□□□ -1.38
GYPB-204ENST00000504951 MYOFQ9NZM1 2061 aa6.4□□□□□ -1.39
GYPB-204ENST00000504951 USP9XQ93008 2570 aaPredicted RBP6.39□□□□□ -1.39
GYPB-204ENST00000504951 HNRNPDLO14979 420 aaKnown RBP6.39□□□□□ -1.39
GYPB-204ENST00000504951 TRIM66O15016 1216 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 YKT6O15498 198 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 GREM1O60565 184 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 HUS1O60921 280 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 CISD3P0C7P0 127 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 ZDHHC11BP0C7U3 371 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 MAOBP27338 520 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 CTSKP43235 329 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 SLC12A3P55017 1021 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 POSTNQ15063 836 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 TEAD4Q15561 434 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 ZRSR1Q15695 479 aaKnown RBP6.39□□□□□ -1.39
GYPB-204ENST00000504951 TBC1D25Q3MII6 688 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 C10orf76Q5T2E6 689 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 DCAF12L1Q5VU92 463 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 SDHAF4Q5VUM1 108 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 EGFLAMQ63HQ2 1017 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 SLC39A4Q6P5W5 647 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 FBXL19Q6PCT2 694 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 IGF2-ASQ6U949 168 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 CRELD2Q6UXH1 353 aaPredicted RBP6.39□□□□□ -1.39
GYPB-204ENST00000504951 MIB1Q86YT6 1006 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 CHPFQ8IZ52 775 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 LSMEM2Q8N112 164 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 ZNF276Q8N554 614 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 KRI1Q8N9T8 703 aaKnown RBP6.39□□□□□ -1.39
GYPB-204ENST00000504951 PDZD8Q8NEN9 1154 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 CACTINQ8WUQ7 758 aaKnown RBP6.39□□□□□ -1.39
GYPB-204ENST00000504951 TTC9Q92623 222 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 HIC2Q96JB3 615 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 ZNF578Q96N58 590 aaPredicted RBP6.39□□□□□ -1.39
GYPB-204ENST00000504951 SLITRK1Q96PX8 696 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 XPO6Q96QU8 1125 aaKnown RBP6.39□□□□□ -1.39
GYPB-204ENST00000504951 LLPHQ9BRT6 129 aaKnown RBP6.39□□□□□ -1.39
GYPB-204ENST00000504951 MSTO1Q9BUK6 570 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 DPH1Q9BZG8 443 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 PRDM16Q9HAZ2 1276 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 MAGEC2Q9UBF1 373 aaPredicted RBP6.39□□□□□ -1.39
GYPB-204ENST00000504951 L1RE1Q9UN81 338 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 BTBD3Q9Y2F9 522 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 ATMQ13315 3056 aa6.39□□□□□ -1.39
GYPB-204ENST00000504951 A0A1B0GTQ1 180 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 FAM149AA5PLN7 773 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 MEI4A8MW99 385 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 C10orf142B7Z368 130 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 TIMM44O43615 452 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 RTN3O95197 1032 aaPredicted RBP6.38□□□□□ -1.39
GYPB-204ENST00000504951 VARSP26640 1264 aaKnown RBP6.38□□□□□ -1.39
GYPB-204ENST00000504951 MATR3P43243 847 aaKnown RBP eCLIP6.38□□□□□ -1.39
GYPB-204ENST00000504951 CCT8P50990 548 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 TPMTP51580 245 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 TMPRSS3P57727 454 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 SH3BP2P78314 561 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 ASIC1P78348 528 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 GUCA2AQ02747 115 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 ZBTB16Q05516 673 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 GRIN1Q05586 938 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 PDE4CQ08493 712 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 KCNH2Q12809 1159 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 MYO1EQ12965 1108 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 GNL2Q13823 731 aaKnown RBP6.38□□□□□ -1.39
GYPB-204ENST00000504951 SF3A1Q15459 793 aaKnown RBP6.38□□□□□ -1.39
GYPB-204ENST00000504951 KIF19Q2TAC6 998 aa6.38□□□□□ -1.39
GYPB-204ENST00000504951 TAF1BQ53T94 588 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms