RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 SDF4Q9BRK5 362 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 CNPPD1Q9BV87 410 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 LMAN2LQ9H0V9 348 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 IL25Q9H293 177 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 MTG2Q9H4K7 406 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 NECTIN3Q9NQS3 549 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 TDP1Q9NUW8 608 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 TMEM51Q9NW97 253 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 TRMT1Q9NXH9 659 aaKnown RBP4.53□□□□□ -1.68
RFC1-208ENST00000504849 GGA3Q9NZ52 723 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 BTBD7Q9P203 1132 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 DBF4Q9UBU7 674 aaPredicted RBP4.53□□□□□ -1.68
RFC1-208ENST00000504849 FEZ2Q9UHY8 353 aaPredicted RBP4.53□□□□□ -1.68
RFC1-208ENST00000504849 RCOR1Q9UKL0 485 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 PCDHB4Q9Y5E5 795 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 PCDHA13Q9Y5I0 950 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 TUBGCP6Q96RT7 1819 aa4.53□□□□□ -1.68
RFC1-208ENST00000504849 METP08581 1390 aa4.53□□□□□ -1.69
RFC1-208ENST00000504849 AK9Q5TCS8 1911 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 NALCNQ8IZF0 1738 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 SLIT1O75093 1534 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 CHD2O14647 1828 aaKnown RBP4.52□□□□□ -1.69
RFC1-208ENST00000504849 A0A0A6YYJ9 748 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 PRAMEF22A3QJZ6 481 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 ACOT7O00154 380 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 TULP2O00295 520 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 IPO5O00410 1097 aaKnown RBP4.52□□□□□ -1.69
RFC1-208ENST00000504849 IKBKBO14920 756 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 ARHGAP6O43182 974 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 DHX16O60231 1041 aaKnown RBP4.52□□□□□ -1.69
RFC1-208ENST00000504849 PLOD3O60568 738 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 PFKFB2O60825 505 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 ERLIN1O75477 346 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 GFPT2O94808 682 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 YEATS4O95619 227 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 POLBP06746 335 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 ANXA2P07355 339 aaKnown RBP4.52□□□□□ -1.69
RFC1-208ENST00000504849 TUBBP07437 444 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 PNMA6AP0CW24 399 aaPredicted RBP4.52□□□□□ -1.69
RFC1-208ENST00000504849 CKMT1AP12532 417 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 NPR1P16066 1061 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 CASQ1P31415 396 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 MSX2P35548 267 aaPredicted RBP4.52□□□□□ -1.69
RFC1-208ENST00000504849 PAPOLAP51003 745 aaKnown RBP4.52□□□□□ -1.69
RFC1-208ENST00000504849 MEF2AQ02078 507 aaPredicted RBP4.52□□□□□ -1.69
RFC1-208ENST00000504849 TRPC3Q13507 836 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 TUBB2AQ13885 445 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 STK38Q15208 465 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 KLHDC7AQ5VTJ3 777 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 OLFM4Q6UX06 510 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 SYT10Q6XYQ8 523 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 C11orf57Q6ZUT1 292 aaPredicted RBP4.52□□□□□ -1.69
RFC1-208ENST00000504849 GALNT5Q7Z7M9 940 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 DHX40Q8IX18 779 aaKnown RBP4.52□□□□□ -1.69
RFC1-208ENST00000504849 SDR16C5Q8N3Y7 309 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 GPR156Q8NFN8 814 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 GOLGA5Q8TBA6 731 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 BRIX1Q8TDN6 353 aaKnown RBP4.52□□□□□ -1.69
RFC1-208ENST00000504849 CLEC4DQ8WXI8 215 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 HERVK_113Q902F9 699 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 CFHR4Q92496 578 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 GOLGA1Q92805 767 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 PGBD1Q96JS3 809 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 HIST1H2AHQ96KK5 128 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 MPHOSPH8Q99549 860 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 HIST1H2AJQ99878 128 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 TUBB2BQ9BVA1 445 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 MANSC1Q9H8J5 431 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 SAYSD1Q9NPB0 183 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 PARPBPQ9NWS1 579 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 PSD3Q9NYI0 1048 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 NKIRAS2Q9NYR9 191 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.52□□□□□ -1.69
RFC1-208ENST00000504849 COL20A1Q9P218 1284 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 CPNE7Q9UBL6 633 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 ABCF2Q9UG63 623 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 HOOK1Q9UJC3 728 aaKnown RBP4.52□□□□□ -1.69
RFC1-208ENST00000504849 NAP1L2Q9ULW6 460 aaPredicted RBP4.52□□□□□ -1.69
RFC1-208ENST00000504849 USP18Q9UMW8 372 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 USP16Q9Y5T5 823 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 OVOS2A0A0G2JMS6 1433 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 NCAPD2Q15021 1401 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 DIP2AQ14689 1571 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 PLEKHG1Q9ULL1 1385 aa4.52□□□□□ -1.69
RFC1-208ENST00000504849 TOPAZ1Q8N9V7 1692 aa4.51□□□□□ -1.69
RFC1-208ENST00000504849 LRP6O75581 1613 aa4.51□□□□□ -1.69
RFC1-208ENST00000504849 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.51□□□□□ -1.69
RFC1-208ENST00000504849 PI4KAP2A4QPH2 592 aa4.51□□□□□ -1.69
RFC1-208ENST00000504849 USP27XA6NNY8 438 aa4.51□□□□□ -1.69
RFC1-208ENST00000504849 CUTAO60888 179 aa4.51□□□□□ -1.69
RFC1-208ENST00000504849 MAFO75444 373 aaPredicted RBP4.51□□□□□ -1.69
RFC1-208ENST00000504849 SEC24DO94855 1032 aaPredicted RBP4.51□□□□□ -1.69
RFC1-208ENST00000504849 TBX18O95935 607 aa4.51□□□□□ -1.69
RFC1-208ENST00000504849 SERPINC1P01008 464 aa4.51□□□□□ -1.69
RFC1-208ENST00000504849 SLC3A2P08195 630 aaKnown RBP4.51□□□□□ -1.69
RFC1-208ENST00000504849 ITGA5P08648 1049 aa4.51□□□□□ -1.69
RFC1-208ENST00000504849 TOP1P11387 765 aaKnown RBP4.51□□□□□ -1.69
RFC1-208ENST00000504849 MYL4P12829 197 aa4.51□□□□□ -1.69
RFC1-208ENST00000504849 FAHP16930 419 aa4.51□□□□□ -1.69
RFC1-208ENST00000504849 CNTFP26441 200 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms