RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 ARHGEF4Q9NR80 690 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 SPHK2Q9NRA0 654 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 ST7Q9NRC1 585 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 PLK2Q9NYY3 685 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 MARCH2Q9P0N8 246 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 SMG5Q9UPR3 1016 aaKnown RBP14.95□□□□□ -0.02
HOXC9-202ENST00000504557 EP300Q09472 2414 aaPredicted RBP14.95□□□□□ -0.02
HOXC9-202ENST00000504557 YJEFN3A6XGL0 299 aa14.94□□□□□ -0.02
HOXC9-202ENST00000504557 E7ENQ6 273 aa14.94□□□□□ -0.02
HOXC9-202ENST00000504557 K7EQS6 105 aa14.94□□□□□ -0.02
HOXC9-202ENST00000504557 TRIM24O15164 1050 aa14.94□□□□□ -0.02
HOXC9-202ENST00000504557 KAT7O95251 611 aa14.94□□□□□ -0.02
HOXC9-202ENST00000504557 CORO1AP31146 461 aaKnown RBP14.94□□□□□ -0.02
HOXC9-202ENST00000504557 CNGA2Q16280 664 aa14.94□□□□□ -0.02
HOXC9-202ENST00000504557 MAN2A1Q16706 1144 aa14.94□□□□□ -0.02
HOXC9-202ENST00000504557 DENND1BQ6P3S1 775 aa14.94□□□□□ -0.02
HOXC9-202ENST00000504557 HTR3DQ70Z44 454 aa14.94□□□□□ -0.02
HOXC9-202ENST00000504557 ERLEC1Q96DZ1 483 aa14.94□□□□□ -0.02
HOXC9-202ENST00000504557 TUBGCP2Q9BSJ2 902 aa14.94□□□□□ -0.02
HOXC9-202ENST00000504557 FAM126AQ9BYI3 521 aaPredicted RBP14.94□□□□□ -0.02
HOXC9-202ENST00000504557 SAMSN1Q9NSI8 373 aaKnown RBP14.94□□□□□ -0.02
HOXC9-202ENST00000504557 CLIC5Q9NZA1 410 aa14.94□□□□□ -0.02
HOXC9-202ENST00000504557 SFMBT1Q9UHJ3 866 aa14.94□□□□□ -0.02
HOXC9-202ENST00000504557 RAB23Q9ULC3 237 aa14.94□□□□□ -0.02
HOXC9-202ENST00000504557 STRIP2Q9ULQ0 834 aa14.94□□□□□ -0.02
HOXC9-202ENST00000504557 FAM170AA1A519 330 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 TBC1D3BA6NDS4 549 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 KCNJ18B7U540 433 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 LILRB5O75023 590 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 TULP3O75386 442 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 PON1P27169 355 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 ERCC5P28715 1186 aaPredicted RBP14.93□□□□□ -0.02
HOXC9-202ENST00000504557 GNA15P30679 374 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 COG7P83436 770 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 SIM2Q14190 667 aaPredicted RBP14.93□□□□□ -0.02
HOXC9-202ENST00000504557 KCNJ12Q14500 433 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 DMC1Q14565 340 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 PKDCCQ504Y2 493 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 EMC10Q5UCC4 262 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 BSPRYQ5W0U4 402 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 KLHDC10Q6PID8 442 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 MAMSTRQ6ZN01 415 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 CEP68Q76N32 757 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 DENND1CQ8IV53 801 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 KIAA2013Q8IYS2 634 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 SUMF1Q8NBK3 374 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 NELL1Q92832 810 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 ACDQ96AP0 544 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 CDK5RAP1Q96SZ6 601 aaKnown RBP14.93□□□□□ -0.02
HOXC9-202ENST00000504557 DNAJC17Q9NVM6 304 aaKnown RBP14.93□□□□□ -0.02
HOXC9-202ENST00000504557 TAB2Q9NYJ8 693 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 AJAP1Q9UKB5 411 aaPredicted RBP14.93□□□□□ -0.02
HOXC9-202ENST00000504557 THADAQ6YHU6 1953 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 DMDP11532 3685 aa14.93□□□□□ -0.02
HOXC9-202ENST00000504557 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.92□□□□□ -0.02
HOXC9-202ENST00000504557 MSI1O43347 362 aaKnown RBP14.92□□□□□ -0.02
HOXC9-202ENST00000504557 HRO43593 1189 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 GREM1O60565 184 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 GABBR2O75899 941 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 KLF8O95600 359 aaPredicted RBP14.92□□□□□ -0.02
HOXC9-202ENST00000504557 KLKB1P03952 638 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 PNMA6AP0CW24 399 aaPredicted RBP14.92□□□□□ -0.02
HOXC9-202ENST00000504557 TYRP14679 529 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 ZNF132P52740 706 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 DAOAP59103 153 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 STILQ15468 1287 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 VWA3BQ502W6 1294 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 C10orf76Q5T2E6 689 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 PM20D1Q6GTS8 502 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 SASS6Q6UVJ0 657 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 BHLHA9Q7RTU4 235 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 LONP2Q86WA8 852 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 PASD1Q8IV76 773 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 FMNL3Q8IVF7 1028 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 ALLCQ8N6M5 410 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 KIAA1958Q8N8K9 716 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 USP33Q8TEY7 942 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 SLC35F5Q8WV83 523 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 KCTD13Q8WZ19 329 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 RUBCNQ92622 972 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 NDST4Q9H3R1 872 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 DEC1Q9P2X7 70 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 APEX2Q9UBZ4 518 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 DNAJC12Q9UKB3 198 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 INVSQ9Y283 1065 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 NFE2L3Q9Y4A8 694 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 OTOGLQ3ZCN5 2332 aa14.92□□□□□ -0.02
HOXC9-202ENST00000504557 GPR179Q6PRD1 2367 aa14.91□□□□□ -0.02
HOXC9-202ENST00000504557 BECN2A8MW95 431 aa14.91□□□□□ -0.02
HOXC9-202ENST00000504557 HOXC11O43248 304 aaPredicted RBP14.91□□□□□ -0.02
HOXC9-202ENST00000504557 MED7O43513 233 aa14.91□□□□□ -0.02
HOXC9-202ENST00000504557 PAPSS2O95340 614 aaPredicted RBP14.91□□□□□ -0.02
HOXC9-202ENST00000504557 WASP42768 502 aa14.91□□□□□ -0.02
HOXC9-202ENST00000504557 DGKEP52429 567 aa14.91□□□□□ -0.02
HOXC9-202ENST00000504557 RAPGEF1Q13905 1077 aa14.91□□□□□ -0.02
HOXC9-202ENST00000504557 MIIPQ5JXC2 388 aa14.91□□□□□ -0.02
HOXC9-202ENST00000504557 GRAMD4Q6IC98 578 aa14.91□□□□□ -0.02
HOXC9-202ENST00000504557 C11orf57Q6ZUT1 292 aaPredicted RBP14.91□□□□□ -0.02
HOXC9-202ENST00000504557 ENOSF1Q7L5Y1 443 aa14.91□□□□□ -0.02
HOXC9-202ENST00000504557 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms