RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 RBM17Q96I25 401 aaKnown RBP5.53□□□□□ -1.52
NIPBL-204ENST00000504430 BCL7BQ9BQE9 202 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 RC3H2Q9HBD1 1191 aaKnown RBP5.53□□□□□ -1.52
NIPBL-204ENST00000504430 HCFC1R1Q9NWW0 138 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.53□□□□□ -1.52
NIPBL-204ENST00000504430 TMEM94Q12767 1356 aa5.53□□□□□ -1.52
NIPBL-204ENST00000504430 H7C4K7 107 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 EXOC3O60645 756 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 NPPAP01160 153 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 AMY1AP04745 511 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 PRKCBP05771 671 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 CD6P30203 668 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 USP11P51784 963 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 RBM6P78332 1123 aaKnown RBP5.52□□□□□ -1.53
NIPBL-204ENST00000504430 MGAT5Q09328 741 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 BNIP1Q12981 228 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 NFIL3Q16649 462 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 FAM111BQ6SJ93 734 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 LRSAM1Q6UWE0 723 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 RSPH3Q86UC2 560 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 LZTR1Q8N653 840 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 NAT16Q8N8M0 369 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 SPERTQ8NA61 448 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 REPS2Q8NFH8 660 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 MMP19Q99542 508 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 RTKNQ9BST9 563 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 MRPL46Q9H2W6 279 aaKnown RBP5.52□□□□□ -1.53
NIPBL-204ENST00000504430 TM9SF3Q9HD45 589 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 RPH3AQ9Y2J0 694 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-204ENST00000504430 KIF28PB7ZC32 967 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 M0R082 166 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 FGF10O15520 208 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-204ENST00000504430 ZNF254O75437 659 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 TADA2AO75478 443 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 PRDX5P30044 214 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 ACAA2P42765 397 aaKnown RBP5.52□□□□□ -1.53
NIPBL-204ENST00000504430 MAGEA10P43363 369 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-204ENST00000504430 AARSP49588 968 aaKnown RBP eCLIP5.52□□□□□ -1.53
NIPBL-204ENST00000504430 HSD17B4P51659 736 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 PMP22Q01453 160 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 SOX4Q06945 474 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-204ENST00000504430 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.52□□□□□ -1.53
NIPBL-204ENST00000504430 SLC20A2Q08357 652 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 GAS6Q14393 721 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 RPS6KA2Q15349 733 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 FAM182BQ5T319 152 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 METTL11BQ5VVY1 283 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 AP1ARQ63HQ0 302 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 PM20D1Q6GTS8 502 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 ABHD15Q6UXT9 468 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 CATSPERGQ6ZRH7 1159 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 ILDR2Q71H61 639 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 ATG9AQ7Z3C6 839 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 DSG4Q86SJ6 1040 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 WFDC8Q8IUA0 241 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 FAM217AQ8IXS0 508 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 TOP6BLQ8N6T0 577 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 BBOF1Q8ND07 529 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 ZNF417Q8TAU3 575 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 DTNBP1Q96EV8 351 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 ZNF587Q96SQ5 575 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-204ENST00000504430 CDK5RAP1Q96SZ6 601 aaKnown RBP5.52□□□□□ -1.53
NIPBL-204ENST00000504430 PUS3Q9BZE2 481 aaKnown RBP5.52□□□□□ -1.53
NIPBL-204ENST00000504430 ASCC2Q9H1I8 757 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-204ENST00000504430 CYP4F12Q9HCS2 524 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 RPRD1BQ9NQG5 326 aaKnown RBP5.52□□□□□ -1.53
NIPBL-204ENST00000504430 FSCN3Q9NQT6 498 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 FRRS1LQ9P0K9 344 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 HOOK1Q9UJC3 728 aaKnown RBP5.52□□□□□ -1.53
NIPBL-204ENST00000504430 ADAMTS8Q9UP79 889 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 RCE1Q9Y256 329 aa5.52□□□□□ -1.53
NIPBL-204ENST00000504430 MYBBP1AQ9BQG0 1328 aaKnown RBP5.51□□□□□ -1.53
NIPBL-204ENST00000504430 ZNF335Q9H4Z2 1342 aaPredicted RBP5.51□□□□□ -1.53
NIPBL-204ENST00000504430 CCDC78A2IDD5 438 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 SLC35F4A4IF30 521 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 TSPAN9O75954 239 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 CDH3P22223 829 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 CCR1P32246 355 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 PLD1Q13393 1074 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 ITGA7Q13683 1181 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 TNFAIP1Q13829 316 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 TTI2Q6NXR4 508 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 TMEM270Q6UE05 265 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 DNAJC10Q8IXB1 793 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 VGLL2Q8N8G2 317 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 NMD3Q96D46 503 aaKnown RBP5.51□□□□□ -1.53
NIPBL-204ENST00000504430 INTS14Q96SY0 518 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 TXN2Q99757 166 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 SEMA6CQ9H3T2 930 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 MRPS18AQ9NVS2 196 aaKnown RBP5.51□□□□□ -1.53
NIPBL-204ENST00000504430 SLC30A1Q9Y6M5 507 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 RNF225M0QZC1 329 aaPredicted RBP5.51□□□□□ -1.53
NIPBL-204ENST00000504430 SYN3O14994 580 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 SLCO2B1O94956 709 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 TRIM16O95361 564 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 ABHD16AO95870 558 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 MMP2P08253 660 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 XRCC6P12956 609 aaKnown RBP eCLIP5.51□□□□□ -1.53
NIPBL-204ENST00000504430 PCSK1P29120 753 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 BMP8BP34820 402 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms