RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 DIS3LQ8TF46 1054 aaKnown RBP7.89□□□□□ -1.15
NEDD9-208ENST00000504387 TMEM143Q96AN5 459 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 TAAR1Q96RJ0 339 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 CDRT15Q96T59 188 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 CCDC106Q9BWC9 280 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 DDX43Q9NXZ2 648 aaKnown RBP7.89□□□□□ -1.15
NEDD9-208ENST00000504387 HERC5Q9UII4 1024 aaKnown RBP7.89□□□□□ -1.15
NEDD9-208ENST00000504387 SHOC2Q9UQ13 582 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 GNEQ9Y223 722 aaKnown RBP7.89□□□□□ -1.15
NEDD9-208ENST00000504387 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.89□□□□□ -1.15
NEDD9-208ENST00000504387 MYH9P35579 1960 aaKnown RBP7.89□□□□□ -1.15
NEDD9-208ENST00000504387 LRP5O75197 1615 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 ZC3H11AO75152 810 aaKnown RBP eCLIP7.89□□□□□ -1.15
NEDD9-208ENST00000504387 KRT19P08727 400 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 SMIM18P0DKX4 95 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 P4HA1P13674 534 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 QARSP47897 775 aaKnown RBP7.89□□□□□ -1.15
NEDD9-208ENST00000504387 CDKL1Q00532 357 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 ITGA9Q13797 1035 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 DPYSL3Q14195 570 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 ANO4Q32M45 955 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 CIAPIN1Q6FI81 312 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 SWSAP1Q6NVH7 229 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 UGT2A3Q6UWM9 527 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 ATG14Q6ZNE5 492 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 SESTD1Q86VW0 696 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 RNF168Q8IYW5 571 aaPredicted RBP7.89□□□□□ -1.15
NEDD9-208ENST00000504387 KIAA0319LQ8IZA0 1049 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 ABRAQ8N0Z2 381 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 NAT8LQ8N9F0 302 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 TTC13Q8NBP0 860 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 ZNF398Q8TD17 642 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 PPP4R1Q8TF05 950 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 DEPDC1BQ8WUY9 529 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 RMDN3Q96TC7 470 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 CCT7Q99832 543 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 MAGEB5Q9BZ81 275 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 RMI1Q9H9A7 625 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 PCDH9Q9HC56 1237 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 TBC1D22BQ9NU19 505 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 KCNK4Q9NYG8 393 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 GABBR1Q9UBS5 961 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 IP6K2Q9UHH9 426 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 ZNF510Q9Y2H8 683 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 PLLPQ9Y342 182 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 SNCAIPQ9Y6H5 919 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 WNK3Q9BYP7 1800 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 ANKRD12Q6UB98 2062 aa7.89□□□□□ -1.15
NEDD9-208ENST00000504387 F8W8V4 182 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 KRT37O76014 449 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 CST3P01034 146 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 SNRPAP09012 282 aaKnown RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 ADORA2AP29274 412 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 CPOXP36551 454 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 RGS2P41220 211 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 RPL5P46777 297 aaKnown RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 GPC3P51654 580 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 SESN2P58004 480 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 SH2D4BQ5SQS7 431 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 N4BP2L1Q5TBK1 243 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 PDPK2PQ6A1A2 396 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 LAYNQ6UX15 382 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 ANO5Q75V66 913 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 PODNQ7Z5L7 613 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 SLC9A9Q8IVB4 645 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 MYO1HQ8N1T3 1032 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 NAT16Q8N8M0 369 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 GJD4Q96KN9 370 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 ZNF778Q96MU6 729 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 WRNIP1Q96S55 665 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 RPL26L1Q9UNX3 145 aaKnown RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 DDX60LQ5H9U9 1706 aaKnown RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 NRAPQ86VF7 1730 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 ANKRD36CQ5JPF3 1778 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 TPST1O60507 370 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 FKBP6O75344 327 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 TRMUO75648 421 aaKnown RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 STAM2O75886 525 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 MT-CO1P00395 513 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 P4HBP07237 508 aaKnown RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 ARSAP15289 507 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 SLC1A6P48664 564 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 CDH6P55285 790 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 CDH8P55286 799 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 HDAC4P56524 1084 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 MYBPC1Q00872 1141 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 KRT81Q14533 505 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 SLC15A2Q16348 729 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 CRY2Q49AN0 593 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 TMEM198Q66K66 360 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 CYP2R1Q6VVX0 501 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 C10orf107Q8IVU9 208 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 GIPC3Q8TF64 312 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 TFB1MQ8WVM0 346 aaKnown RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 SLC44A1Q8WWI5 657 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 GAB3Q8WWW8 586 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 PRICKLE1Q96MT3 831 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-208ENST00000504387 ZDHHC15Q96MV8 337 aa7.88□□□□□ -1.15
NEDD9-208ENST00000504387 PAIP1Q9H074 479 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms