RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 SOX10P56693 466 aa5.01□□□□□ -1.61
CDC42SE2-204ENST00000502639 SPARCL1Q14515 664 aa5.01□□□□□ -1.61
CDC42SE2-204ENST00000502639 GRM4Q14833 912 aa5.01□□□□□ -1.61
CDC42SE2-204ENST00000502639 PUM3Q15397 648 aaKnown RBP5.01□□□□□ -1.61
CDC42SE2-204ENST00000502639 PFKFB4Q16877 469 aa5.01□□□□□ -1.61
CDC42SE2-204ENST00000502639 FAM153CQ494X1 144 aa5.01□□□□□ -1.61
CDC42SE2-204ENST00000502639 TMEM196Q5HYL7 178 aa5.01□□□□□ -1.61
CDC42SE2-204ENST00000502639 FAM90A2PQ658T7 463 aa5.01□□□□□ -1.61
CDC42SE2-204ENST00000502639 MTHFD1LQ6UB35 978 aa5.01□□□□□ -1.61
CDC42SE2-204ENST00000502639 KIRREL2Q6UWL6 708 aa5.01□□□□□ -1.61
CDC42SE2-204ENST00000502639 PIK3AP1Q6ZUJ8 805 aa5.01□□□□□ -1.61
CDC42SE2-204ENST00000502639 SLC29A4Q7RTT9 530 aa5.01□□□□□ -1.61
CDC42SE2-204ENST00000502639 SFTPA1Q8IWL2 248 aa5.01□□□□□ -1.61
CDC42SE2-204ENST00000502639 TERB1Q8NA31 727 aa5.01□□□□□ -1.61
CDC42SE2-204ENST00000502639 NTN5Q8WTR8 489 aaPredicted RBP5.01□□□□□ -1.61
CDC42SE2-204ENST00000502639 EDC3Q96F86 508 aaKnown RBP5.01□□□□□ -1.61
CDC42SE2-204ENST00000502639 MMS19Q96T76 1030 aa5.01□□□□□ -1.61
CDC42SE2-204ENST00000502639 CIPCQ9C0C6 399 aa5.01□□□□□ -1.61
CDC42SE2-204ENST00000502639 SAP30LQ9HAJ7 183 aa5.01□□□□□ -1.61
CDC42SE2-204ENST00000502639 VPS45Q9NRW7 570 aa5.01□□□□□ -1.61
CDC42SE2-204ENST00000502639 J3KTA2 159 aa5□□□□□ -1.61
CDC42SE2-204ENST00000502639 ASNA1O43681 348 aa5□□□□□ -1.61
CDC42SE2-204ENST00000502639 EXOC3O60645 756 aa5□□□□□ -1.61
CDC42SE2-204ENST00000502639 VIPP01282 170 aa5□□□□□ -1.61
CDC42SE2-204ENST00000502639 SRGAP2BP0DMP2 458 aa5□□□□□ -1.61
CDC42SE2-204ENST00000502639 NPPBP16860 134 aa5□□□□□ -1.61
CDC42SE2-204ENST00000502639 ATF7P17544 494 aaPredicted RBP5□□□□□ -1.61
CDC42SE2-204ENST00000502639 TRAPPC10P48553 1259 aa5□□□□□ -1.61
CDC42SE2-204ENST00000502639 SUMO2P61956 95 aaKnown RBP5□□□□□ -1.61
CDC42SE2-204ENST00000502639 GPC5P78333 572 aa5□□□□□ -1.61
CDC42SE2-204ENST00000502639 DNASE1L3Q13609 305 aa5□□□□□ -1.61
CDC42SE2-204ENST00000502639 PTK2BQ14289 1009 aa5□□□□□ -1.61
CDC42SE2-204ENST00000502639 KCNJ12Q14500 433 aa5□□□□□ -1.61
CDC42SE2-204ENST00000502639 ARL6IP4Q66PJ3 421 aaKnown RBP5□□□□□ -1.61
CDC42SE2-204ENST00000502639 ERAP2Q6P179 960 aa5□□□□□ -1.61
CDC42SE2-204ENST00000502639 CEP85Q6P2H3 762 aa5□□□□□ -1.61
CDC42SE2-204ENST00000502639 PRIMA1Q86XR5 153 aa5□□□□□ -1.61
CDC42SE2-204ENST00000502639 ADGRG3Q86Y34 549 aa5□□□□□ -1.61
CDC42SE2-204ENST00000502639 DDX51Q8N8A6 666 aaKnown RBP eCLIP5□□□□□ -1.61
CDC42SE2-204ENST00000502639 GRAMD1AQ96CP6 724 aa5□□□□□ -1.61
CDC42SE2-204ENST00000502639 MCRS1Q96EZ8 462 aa5□□□□□ -1.61
CDC42SE2-204ENST00000502639 SNX18Q96RF0 628 aa5□□□□□ -1.61
CDC42SE2-204ENST00000502639 SH3BP4Q9P0V3 963 aa5□□□□□ -1.61
CDC42SE2-204ENST00000502639 JTBO76095 146 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 USP1O94782 785 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 ANXA6P08133 673 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 ADRA1DP25100 572 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 KLRK1P26718 216 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 RENBPP51606 427 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 COPB1P53618 953 aaKnown RBP4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 PNLIPRP1P54315 467 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 HOXA4Q00056 320 aaPredicted RBP4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 OS9Q13438 667 aaPredicted RBP4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 TRIM14Q14142 442 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 KRT72Q14CN4 511 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 ST3GAL2Q16842 350 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 ZACNQ401N2 412 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 STRIP1Q5VSL9 837 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 LIN54Q6MZP7 749 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 MSANTD2Q6P1R3 559 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 PGBD2Q6P3X8 592 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 CCDC174Q6PII3 467 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 RASGRP3Q8IV61 690 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 PNPLA1Q8N8W4 532 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 FAM71BQ8TC56 605 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 ZG16BQ96DA0 208 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 ZCWPW1Q9H0M4 648 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 C11orf21Q9P2W6 132 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 CA14Q9ULX7 337 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 MAGED2Q9UNF1 606 aaPredicted RBP4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 WNT6Q9Y6F9 365 aa4.99□□□□□ -1.61
CDC42SE2-204ENST00000502639 WIPF3A6NGB9 483 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 TISP43B9A030 160 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 DNPH1O43598 174 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 TMPRSS11DO60235 418 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 PROP1O75360 226 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 ITGA5P08648 1049 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 ALADP13716 330 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 DRD1P21728 446 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 SERPINF1P36955 418 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 INHBEP58166 350 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 PROSER3Q2NL68 480 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 AWAT1Q58HT5 328 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 TRIM72Q6ZMU5 477 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 RD3Q7Z3Z2 195 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 ZNF804AQ7Z570 1209 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 CHSY1Q86X52 802 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 CACNA2D3Q8IZS8 1091 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 CLASRPQ8N2M8 674 aaKnown RBP4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 ENAHQ8N8S7 591 aaPredicted RBP4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 ATG16L2Q8NAA4 619 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 DPF1Q92782 380 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 RITA1Q96K30 269 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 PRPF18Q99633 342 aaKnown RBP4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 NUDT22Q9BRQ3 303 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 HELLSQ9NRZ9 838 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 GAR1Q9NY12 217 aaKnown RBP4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 GRHPRQ9UBQ7 328 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 PCDHB2Q9Y5E7 798 aa4.98□□□□□ -1.61
CDC42SE2-204ENST00000502639 COX11Q9Y6N1 276 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms