RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 TUBB4BP68371 445 aa17.99■□□□□ 0.47
AP004609.1-201ENST00000498872 DMWDQ09019 674 aa17.99■□□□□ 0.47
AP004609.1-201ENST00000498872 LRRC32Q14392 662 aa17.99■□□□□ 0.47
AP004609.1-201ENST00000498872 LPAL2Q16609 132 aa17.99■□□□□ 0.47
AP004609.1-201ENST00000498872 TEX35Q5T0J7 233 aa17.99■□□□□ 0.47
AP004609.1-201ENST00000498872 PARD3BQ8TEW8 1205 aa17.99■□□□□ 0.47
AP004609.1-201ENST00000498872 MYRFLQ96LU7 910 aa17.99■□□□□ 0.47
AP004609.1-201ENST00000498872 FAM83CQ9BQN1 747 aa17.99■□□□□ 0.47
AP004609.1-201ENST00000498872 NCDNQ9UBB6 729 aa17.99■□□□□ 0.47
AP004609.1-201ENST00000498872 SMG5Q9UPR3 1016 aaKnown RBP17.99■□□□□ 0.47
AP004609.1-201ENST00000498872 LRRIQ3A6PVS8 624 aaPredicted RBP17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 BTNL10A8MVZ5 291 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 PHACTR2O75167 634 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 CKMP06732 381 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 PNMA6AP0CW24 399 aaPredicted RBP17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 H2AFXP16104 143 aaPredicted RBP17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 GTF2H1P32780 548 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 GNL1P36915 607 aaPredicted RBP17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 USP46P62068 366 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 TRPC3Q13507 836 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 RUNX3Q13761 415 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 CC2D1AQ6P1N0 951 aaPredicted RBP17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 FBXO38Q6PIJ6 1188 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 C1orf228Q6PIY5 440 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 ARL14EPQ8N8R7 260 aaPredicted RBP17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 CHFRQ96EP1 664 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 TMEM8AQ9HCN3 771 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 ZMYM5Q9UJ78 669 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 SALL4Q9UJQ4 1053 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 NAGPAQ9UK23 515 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 GPR179Q6PRD1 2367 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 CTAGE15A4D2H0 777 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 CTAGE8P0CG41 777 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 MAGEA11P43364 429 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 BIRC3Q13489 604 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 CCINQ13939 588 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 PPP2R5DQ14738 602 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 KRT39Q6A163 491 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 HEATR6Q6AI08 1181 aaKnown RBP17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 CTAGE6Q86UF2 777 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 CTAGE4Q8IX94 777 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 SPEM1Q8N4L4 309 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 GPR161Q8N6U8 529 aaKnown RBP17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 MYCBPAPQ8TBZ2 947 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 IER2Q9BTL4 223 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 XYLT2Q9H1B5 865 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 EPC1Q9H2F5 836 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 PDCL3Q9H2J4 239 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 KIF9Q9HAQ2 790 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 COQ4Q9Y3A0 265 aa17.98■□□□□ 0.47
AP004609.1-201ENST00000498872 DDX3XO00571 662 aaKnown RBP eCLIP17.97■□□□□ 0.47
AP004609.1-201ENST00000498872 RAP1GAPP47736 663 aa17.97■□□□□ 0.47
AP004609.1-201ENST00000498872 CACNA2D1P54289 1103 aa17.97■□□□□ 0.47
AP004609.1-201ENST00000498872 CKAP4Q07065 602 aaKnown RBP17.97■□□□□ 0.47
AP004609.1-201ENST00000498872 MAPRE1Q15691 268 aaKnown RBP17.97■□□□□ 0.47
AP004609.1-201ENST00000498872 DGKKQ5KSL6 1271 aa17.97■□□□□ 0.47
AP004609.1-201ENST00000498872 TDRD10Q5VZ19 366 aaKnown RBP17.97■□□□□ 0.47
AP004609.1-201ENST00000498872 NAIF1Q69YI7 327 aaPredicted RBP17.97■□□□□ 0.47
AP004609.1-201ENST00000498872 ALKBH5Q6P6C2 394 aaKnown RBP17.97■□□□□ 0.47
AP004609.1-201ENST00000498872 SCARA5Q6ZMJ2 495 aa17.97■□□□□ 0.47
AP004609.1-201ENST00000498872 MAMSTRQ6ZN01 415 aa17.97■□□□□ 0.47
AP004609.1-201ENST00000498872 ARHGEF19Q8IW93 802 aa17.97■□□□□ 0.47
AP004609.1-201ENST00000498872 SYT11Q9BT88 431 aa17.97■□□□□ 0.47
AP004609.1-201ENST00000498872 PACSIN1Q9BY11 444 aa17.97■□□□□ 0.47
AP004609.1-201ENST00000498872 FAM126AQ9BYI3 521 aaPredicted RBP17.97■□□□□ 0.47
AP004609.1-201ENST00000498872 TMEM30AQ9NV96 361 aa17.97■□□□□ 0.47
AP004609.1-201ENST00000498872 WNT6Q9Y6F9 365 aa17.97■□□□□ 0.47
AP004609.1-201ENST00000498872 TRAV19A0A0A6YYK7 116 aa17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 A8MXQ7 604 aa17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 CHURC1-FNTBB4DL54 471 aa17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 F8VP50 259 aa17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 CLDN5O00501 218 aa17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 USP17L7P0C7H9 530 aa17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 PRLRP16471 622 aa17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 PTPN1P18031 435 aaKnown RBP17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 FNTBP49356 437 aa17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 NRLP54845 237 aa17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 CDH8P55286 799 aa17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 IFRD2Q12894 506 aaPredicted RBP17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 SRSF5Q13243 272 aaKnown RBP17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 ARHGAP44Q17R89 818 aa17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 PKN3Q6P5Z2 889 aa17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 VSTM1Q6UX27 236 aa17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 DENND5BQ6ZUT9 1274 aa17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 SLC30A5Q8TAD4 765 aa17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 OLIG1Q8TAK6 271 aa17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 RMDN1Q96DB5 314 aa17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 SMYD3Q9H7B4 428 aa17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 UBE2TQ9NPD8 197 aaPredicted RBP17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 INTUQ9ULD6 942 aa17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 SNX12Q9UMY4 172 aa17.96■□□□□ 0.47
AP004609.1-201ENST00000498872 BUB1O43683 1085 aa17.95■□□□□ 0.46
AP004609.1-201ENST00000498872 ZNF77Q15935 545 aa17.95■□□□□ 0.46
AP004609.1-201ENST00000498872 PRR23BQ6ZRT6 265 aa17.95■□□□□ 0.46
AP004609.1-201ENST00000498872 SPATA17Q96L03 361 aa17.95■□□□□ 0.46
AP004609.1-201ENST00000498872 ZNF518BQ9C0D4 1074 aa17.95■□□□□ 0.46
AP004609.1-201ENST00000498872 FBRSL1Q9HCM7 1045 aaKnown RBP17.95■□□□□ 0.46
AP004609.1-201ENST00000498872 DUS2Q9NX74 493 aaKnown RBP17.95■□□□□ 0.46
AP004609.1-201ENST00000498872 K7ESF4 209 aa17.94■□□□□ 0.46
AP004609.1-201ENST00000498872 FOXN3O00409 490 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms