RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	SCAMP3	O14828	347 aa	Known RBP	11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	CYP26A1	O43174	497 aa		11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	AFP	P02771	609 aa	Known RBP	11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	SP9	P0CG40	484 aa		11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	PRKCSH	P14314	528 aa	Predicted RBP	11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	NBL1	P41271	181 aa		11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	MTIF2	P46199	727 aa	Known RBP	11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	MTAP	Q13126	283 aa		11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	GOLGA7B	Q2TAP0	167 aa		11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	SGO2	Q562F6	1265 aa		11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	CLEC20A	Q6ZU45	233 aa		11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	TADA2B	Q86TJ2	420 aa		11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	GPR161	Q8N6U8	529 aa	Known RBP	11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	CLDN23	Q96B33	292 aa		11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	CLSTN2	Q9H4D0	955 aa		11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	FAM124B	Q9H5Z6	455 aa	Predicted RBP	11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	ECT2	Q9H8V3	914 aa		11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	HPS4	Q9NQG7	708 aa		11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	RBM12	Q9NTZ6	932 aa	Known RBP	11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	GCNT4	Q9P109	453 aa		11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	NAGPA	Q9UK23	515 aa		11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	LSM7	Q9UK45	103 aa	Known RBP	11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	FBXO4	Q9UKT5	387 aa		11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	PCDHB4	Q9Y5E5	795 aa		11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	CACNA1H	O95180	2353 aa		11.24	□□□□□ -0.61
CDK11A-222	ENST00000498810	MYOF	Q9NZM1	2061 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	COCH	O43405	550 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	TLR5	O60602	858 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	BEST1	O76090	585 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	OAS1	P00973	400 aa	Known RBP	11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	RALA	P11233	206 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	CXCL12	P48061	93 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	TUB	P50607	506 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	BCAT1	P54687	386 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	NRL	P54845	237 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	SLC7A9	P82251	487 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	TXNDC11	Q6PKC3	985 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	TMEM270	Q6UE05	265 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	PAQR9	Q6ZVX9	377 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	RSRC2	Q7L4I2	434 aa	Known RBP	11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	FAM114A1	Q8IWE2	563 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	SIX6OS1	Q8N1H7	587 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	CD101	Q93033	1021 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	CNOT6L	Q96LI5	555 aa	Known RBP	11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	IPO9	Q96P70	1041 aa	Known RBP	11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	DUSP9	Q99956	384 aa	Known RBP	11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	P2RY13	Q9BPV8	354 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	FAM83C	Q9BQN1	747 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	DUSP16	Q9BY84	665 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	CCSER2	Q9H7U1	834 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	CSNK1G1	Q9HCP0	422 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	PNPLA8	Q9NP80	782 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	TBC1D14	Q9P2M4	693 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	RWDD2A	Q9UIY3	292 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	RAB23	Q9ULC3	237 aa		11.23	□□□□□ -0.61
CDK11A-222	ENST00000498810	PRR23A	A6NEV1	266 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	TNFRSF10B	O14763	440 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	P4HA2	O15460	535 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	ATG13	O75143	517 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	CHRNB1	P11230	501 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	KRT5	P13647	590 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	TCF3	P15923	654 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	DRD1	P21728	446 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	BMP6	P22004	513 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	GJA4	P35212	333 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	ATP5C1	P36542	298 aa	Known RBP	11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	RNF144A	P50876	292 aa	Predicted RBP	11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	RAD23B	P54727	409 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	EML3	Q32P44	896 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	ZNF528	Q3MIS6	628 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	C10orf120	Q5SQS8	335 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	BTBD8	Q5XKL5	378 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	FOXR2	Q6PJQ5	311 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	TSSK4	Q6SA08	328 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810		Q6ZS52	159 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	GPRIN1	Q7Z2K8	1008 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	ARHGAP18	Q8N392	663 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	SYNPO	Q8N3V7	929 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	SPEM1	Q8N4L4	309 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	MLKL	Q8NB16	471 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	SLC4A11	Q8NBS3	891 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	ZMIZ2	Q8NF64	920 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	CCDC26	Q8TAB7	109 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	RIN3	Q8TB24	985 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	WHAMM	Q8TF30	809 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	SECISBP2L	Q93073	1101 aa	Known RBP	11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	RNF38	Q9H0F5	515 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	SEMA4A	Q9H3S1	761 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	LRRC4	Q9HBW1	653 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	RASAL2	Q9UJF2	1139 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	TSPAN16	Q9UKR8	245 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	SCML2	Q9UQR0	700 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810	COQ4	Q9Y3A0	265 aa		11.22	□□□□□ -0.61
CDK11A-222	ENST00000498810		A0A1W2PQH9	124 aa		11.21	□□□□□ -0.61
CDK11A-222	ENST00000498810		M0QYV0	167 aa		11.21	□□□□□ -0.61
CDK11A-222	ENST00000498810	LMNA	P02545	664 aa	Known RBP	11.21	□□□□□ -0.61
CDK11A-222	ENST00000498810	VDR	P11473	427 aa		11.21	□□□□□ -0.61
CDK11A-222	ENST00000498810	ADH5	P11766	374 aa		11.21	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms