RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 STAG3L1P0CL83 205 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 PTPN11Q06124 597 aaPredicted RBP17.03■□□□□ 0.32
COL6A1-206ENST00000498614 KCTD2Q14681 263 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 FAM182AQ5T1J6 154 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 PPFIBP2Q8ND30 876 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 GATA6Q92908 595 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 CPB2Q96IY4 423 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 CYTH2Q99418 400 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 SMARCAD1Q9H4L7 1026 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 ZNF212Q9UDV6 495 aa17.03■□□□□ 0.32
COL6A1-206ENST00000498614 M0QYV0 167 aa17.02■□□□□ 0.32
COL6A1-206ENST00000498614 PIK3R2O00459 728 aa17.02■□□□□ 0.32
COL6A1-206ENST00000498614 HBP1O60381 514 aa17.02■□□□□ 0.32
COL6A1-206ENST00000498614 MICAL2O94851 1124 aa17.02■□□□□ 0.32
COL6A1-206ENST00000498614 SLC25A27O95847 323 aa17.02■□□□□ 0.32
COL6A1-206ENST00000498614 ELK3P41970 407 aa17.02■□□□□ 0.32
COL6A1-206ENST00000498614 SERPINB4P48594 390 aa17.02■□□□□ 0.32
COL6A1-206ENST00000498614 ERFP50548 548 aa17.02■□□□□ 0.32
COL6A1-206ENST00000498614 SLC18A2Q05940 514 aa17.02■□□□□ 0.32
COL6A1-206ENST00000498614 KBTBD12Q3ZCT8 623 aa17.02■□□□□ 0.32
COL6A1-206ENST00000498614 GJC2Q5T442 439 aaPredicted RBP17.02■□□□□ 0.32
COL6A1-206ENST00000498614 BBS12Q6ZW61 710 aa17.02■□□□□ 0.32
COL6A1-206ENST00000498614 TREML1Q86YW5 311 aa17.02■□□□□ 0.32
COL6A1-206ENST00000498614 RFX6Q8HWS3 928 aa17.02■□□□□ 0.32
COL6A1-206ENST00000498614 PDIK1LQ8N165 341 aa17.02■□□□□ 0.32
COL6A1-206ENST00000498614 KCTD6Q8NC69 237 aa17.02■□□□□ 0.32
COL6A1-206ENST00000498614 FAM161BQ96MY7 647 aa17.02■□□□□ 0.32
COL6A1-206ENST00000498614 CNTN3Q9P232 1028 aa17.02■□□□□ 0.32
COL6A1-206ENST00000498614 IQANK1A0A1B0GTG1 560 aa17.02■□□□□ 0.31
COL6A1-206ENST00000498614 TCRBV9S1A1TA0A576 114 aa17.02■□□□□ 0.31
COL6A1-206ENST00000498614 FAM155AB1AL88 458 aaPredicted RBP17.02■□□□□ 0.31
COL6A1-206ENST00000498614 B2RBV5 119 aa17.02■□□□□ 0.31
COL6A1-206ENST00000498614 SMAPO00193 183 aa17.02■□□□□ 0.31
COL6A1-206ENST00000498614 MIPP30301 263 aa17.02■□□□□ 0.31
COL6A1-206ENST00000498614 ZRSR2Q15696 482 aaKnown RBP17.02■□□□□ 0.31
COL6A1-206ENST00000498614 HSF5Q4G112 596 aaPredicted RBP17.02■□□□□ 0.31
COL6A1-206ENST00000498614 MDH1BQ5I0G3 518 aa17.02■□□□□ 0.31
COL6A1-206ENST00000498614 FAM71DQ8N9W8 422 aa17.02■□□□□ 0.31
COL6A1-206ENST00000498614 UBA3Q8TBC4 463 aa17.02■□□□□ 0.31
COL6A1-206ENST00000498614 ZNF184Q99676 751 aaPredicted RBP17.02■□□□□ 0.31
COL6A1-206ENST00000498614 IFT122Q9HBG6 1241 aa17.02■□□□□ 0.31
COL6A1-206ENST00000498614 A0A087WZ62 844 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 ANKRD33BA6NCL7 494 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 C22orf31O95567 290 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 RAP1GDS1P52306 607 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 BASP1P80723 227 aaKnown RBP17.01■□□□□ 0.31
COL6A1-206ENST00000498614 SYCP2LQ5T4T6 812 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 CDHR3Q6ZTQ4 885 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 FNIP1Q8TF40 1166 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 SLC44A1Q8WWI5 657 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 TMEM176AQ96HP8 235 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 FDXACB1Q9BRP7 624 aaPredicted RBP17.01■□□□□ 0.31
COL6A1-206ENST00000498614 CALN1Q9BXU9 219 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 MAGEA13PA6NCF6 341 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 A8MXQ7 604 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 KBTBD13C9JR72 458 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 H3BRJ5 948 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 CILPO75339 1184 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 FAM155BO75949 473 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 ENO1P06733 434 aaKnown RBP17.01■□□□□ 0.31
COL6A1-206ENST00000498614 GSTA2P09210 222 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 UBTFL6P0CB48 400 aaPredicted RBP17.01■□□□□ 0.31
COL6A1-206ENST00000498614 GCLCP48506 637 aaPredicted RBP17.01■□□□□ 0.31
COL6A1-206ENST00000498614 POLE2P56282 527 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 ZNF200P98182 395 aaPredicted RBP17.01■□□□□ 0.31
COL6A1-206ENST00000498614 FAM102AQ5T9C2 384 aaPredicted RBP17.01■□□□□ 0.31
COL6A1-206ENST00000498614 CCNJLQ8IV13 435 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 TTC13Q8NBP0 860 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 ZFAND2BQ8WV99 257 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 HEXIM2Q96MH2 286 aaKnown RBP17.01■□□□□ 0.31
COL6A1-206ENST00000498614 ETAA1Q9NY74 926 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 CPSF2Q9P2I0 782 aaKnown RBP17.01■□□□□ 0.31
COL6A1-206ENST00000498614 EFR3BQ9Y2G0 817 aa17.01■□□□□ 0.31
COL6A1-206ENST00000498614 DNAJC25-GNG10A0A024R161 153 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 CAPN14A8MX76 684 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 INHBAP08476 426 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 SLC10A3P09131 477 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 RAB6CQ53S08 254 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 SH3PXD2AQ5TCZ1 1133 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 FAM91A1Q658Y4 838 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 ANKRD23Q86SG2 305 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 CCDC110Q8TBZ0 833 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 CLPTM1LQ96KA5 538 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 ADPGKQ9BRR6 497 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 MECRQ9BV79 373 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 RAB6CQ9H0N0 254 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 PRMT7Q9NVM4 692 aaPredicted RBP17■□□□□ 0.31
COL6A1-206ENST00000498614 CPA4Q9UI42 421 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 USP18Q9UMW8 372 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 IKBKGQ9Y6K9 419 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 RNF8O76064 485 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 INSRRP14616 1297 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 SLC26A2P50443 739 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 EIF3EP60228 445 aaKnown RBP17■□□□□ 0.31
COL6A1-206ENST00000498614 MMRN1Q13201 1228 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 TAZQ16635 292 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 CES4AQ5XG92 561 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 NPNTQ6UXI9 565 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 PRPF39Q86UA1 669 aaKnown RBP17■□□□□ 0.31
COL6A1-206ENST00000498614 RBM15BQ8NDT2 890 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms