RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 PTPN9P43378 593 aa14.58□□□□□ -0.07
ATPAF2-208ENST00000496852 TUBP50607 506 aa14.58□□□□□ -0.07
ATPAF2-208ENST00000496852 ZNF143P52747 638 aaPredicted RBP14.58□□□□□ -0.07
ATPAF2-208ENST00000496852 ITIH3Q06033 890 aa14.58□□□□□ -0.07
ATPAF2-208ENST00000496852 CCDC14Q49A88 953 aa14.58□□□□□ -0.07
ATPAF2-208ENST00000496852 DCAF6Q58WW2 860 aa14.58□□□□□ -0.07
ATPAF2-208ENST00000496852 MSANTD2Q6P1R3 559 aa14.58□□□□□ -0.07
ATPAF2-208ENST00000496852 TPCN2Q8NHX9 752 aa14.58□□□□□ -0.07
ATPAF2-208ENST00000496852 SHKBP1Q8TBC3 707 aa14.58□□□□□ -0.07
ATPAF2-208ENST00000496852 ZNF592Q92610 1267 aa14.58□□□□□ -0.07
ATPAF2-208ENST00000496852 TCEAL4Q96EI5 215 aa14.58□□□□□ -0.07
ATPAF2-208ENST00000496852 CALR3Q96L12 384 aaKnown RBP14.58□□□□□ -0.07
ATPAF2-208ENST00000496852 CFAP57Q96MR6 1250 aa14.58□□□□□ -0.07
ATPAF2-208ENST00000496852 NPY6RQ99463 290 aa14.58□□□□□ -0.07
ATPAF2-208ENST00000496852 APOL5Q9BWW9 433 aa14.58□□□□□ -0.07
ATPAF2-208ENST00000496852 ADAM33Q9BZ11 813 aa14.58□□□□□ -0.07
ATPAF2-208ENST00000496852 ADAM7Q9H2U9 754 aa14.58□□□□□ -0.07
ATPAF2-208ENST00000496852 CCSER2Q9H7U1 834 aa14.58□□□□□ -0.07
ATPAF2-208ENST00000496852 NUDT5Q9UKK9 219 aa14.58□□□□□ -0.07
ATPAF2-208ENST00000496852 MYO1FO00160 1098 aa14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 ZNF500O60304 480 aaPredicted RBP14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 TLR5O60602 858 aa14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 MOCS3O95396 460 aa14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 RALAP11233 206 aa14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 GJA1P17302 382 aa14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 SDC4P31431 198 aa14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 GNG11P61952 73 aa14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 PITX1P78337 314 aaPredicted RBP14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 CYP4F8P98187 520 aa14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 SLC25A52Q3SY17 297 aa14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 ZNF569Q5MCW4 686 aa14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 HECTD3Q5T447 861 aa14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 OTUD1Q5VV17 481 aaPredicted RBP14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 BNIPLQ7Z465 357 aa14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 NIPA2Q8N8Q9 360 aa14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 DQX1Q8TE96 717 aaKnown RBP14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 GCNAQ96QF7 691 aa14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 IRX2Q9BZI1 471 aaPredicted RBP14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 ATXN3LQ9H3M9 355 aa14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 OLA1Q9NTK5 396 aaKnown RBP14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 RRN3Q9NYV6 651 aa14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 IP6K2Q9UHH9 426 aa14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 CDH22Q9UJ99 828 aa14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 STAP1Q9ULZ2 295 aa14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 KIF26AQ9ULI4 1882 aaPredicted RBP14.58□□□□□ -0.08
ATPAF2-208ENST00000496852 DOCK4Q8N1I0 1966 aa14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 C2orf78A6NCI8 922 aa14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 ZNF197O14709 1029 aa14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 BUB1BO60566 1050 aaPredicted RBP14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 OLFM2O95897 454 aa14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 IGLV3-25P01717 112 aa14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 TFE3P19532 575 aaPredicted RBP14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 PSMA2P25787 234 aa14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 CCDC85BQ15834 202 aaPredicted RBP14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 IFI16Q16666 785 aaKnown RBP14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 C15orf59Q2T9L4 293 aaPredicted RBP14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 KLHDC10Q6PID8 442 aa14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 EP400NLQ6ZTU2 488 aa14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 RNF139Q8WU17 664 aa14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 MRPS31Q92665 395 aaKnown RBP14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 CENPIQ92674 756 aaPredicted RBP14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 PGAP3Q96FM1 320 aaPredicted RBP14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 CDK5RAP1Q96SZ6 601 aaKnown RBP14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 TBCBQ99426 244 aa14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 CNPY3Q9BT09 278 aa14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 SMOC2Q9H3U7 446 aa14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 WDR6Q9NNW5 1121 aaKnown RBP14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 CALCOCO1Q9P1Z2 691 aa14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 LCMT1Q9UIC8 334 aa14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 CAPN6Q9Y6Q1 641 aa14.57□□□□□ -0.08
ATPAF2-208ENST00000496852 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 SOBPA7XYQ1 873 aa14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 COCHO43405 550 aa14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 PROSCO94903 275 aa14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 ENDOD1O94919 500 aa14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 TBX18O95935 607 aa14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 TNNT1P13805 278 aa14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 SULT1E1P49888 294 aa14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 ATP11AP98196 1134 aa14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 EIF4EBP2Q13542 120 aaPredicted RBP14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 PIGHQ14442 188 aaPredicted RBP14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 MESDQ14696 234 aa14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 ACAP1Q15027 740 aa14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 TEAD2Q15562 447 aa14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 STXBP5Q5T5C0 1151 aa14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 TXNDC8Q6A555 127 aa14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 CES5AQ6NT32 575 aa14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 RSRC2Q7L4I2 434 aaKnown RBP14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 LRRC57Q8N9N7 239 aa14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 SMRP1Q8NCR6 262 aa14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 RNF38Q9H0F5 515 aa14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 SFMBT1Q9UHJ3 866 aa14.56□□□□□ -0.08
ATPAF2-208ENST00000496852 CLUHO75153 1309 aa14.55□□□□□ -0.08
ATPAF2-208ENST00000496852 GRID2IPA4D2P6 1211 aa14.55□□□□□ -0.08
ATPAF2-208ENST00000496852 M0QYT0 321 aa14.55□□□□□ -0.08
ATPAF2-208ENST00000496852 MDM4O15151 490 aa14.55□□□□□ -0.08
ATPAF2-208ENST00000496852 TRUB2O95900 331 aaKnown RBP14.55□□□□□ -0.08
ATPAF2-208ENST00000496852 PFKLP17858 780 aa14.55□□□□□ -0.08
ATPAF2-208ENST00000496852 DDX6P26196 483 aaKnown RBP eCLIP14.55□□□□□ -0.08
ATPAF2-208ENST00000496852 MAN1A1P33908 653 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms