RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 RNF152Q8N8N0 203 aa7.04□□□□□ -1.28
TARDBP-210ENST00000496840 SUN3Q8TAQ9 357 aa7.04□□□□□ -1.28
TARDBP-210ENST00000496840 C8orf48Q96LL4 319 aa7.04□□□□□ -1.28
TARDBP-210ENST00000496840 CINPQ9BW66 212 aaPredicted RBP7.04□□□□□ -1.28
TARDBP-210ENST00000496840 COLEC11Q9BWP8 271 aa7.04□□□□□ -1.28
TARDBP-210ENST00000496840 ZBTB26Q9HCK0 441 aa7.04□□□□□ -1.28
TARDBP-210ENST00000496840 SEMA5BQ9P283 1151 aa7.04□□□□□ -1.28
TARDBP-210ENST00000496840 SPATA31A1Q5TZJ5 1347 aa7.03□□□□□ -1.28
TARDBP-210ENST00000496840 KCNQ3O43525 872 aa7.03□□□□□ -1.28
TARDBP-210ENST00000496840 PARNO95453 639 aaKnown RBP7.03□□□□□ -1.28
TARDBP-210ENST00000496840 TSHRP16473 764 aa7.03□□□□□ -1.28
TARDBP-210ENST00000496840 DNASE1L3Q13609 305 aa7.03□□□□□ -1.28
TARDBP-210ENST00000496840 LAMB3Q13751 1172 aa7.03□□□□□ -1.28
TARDBP-210ENST00000496840 SEC23BQ15437 767 aa7.03□□□□□ -1.28
TARDBP-210ENST00000496840 TMTC4Q5T4D3 741 aa7.03□□□□□ -1.28
TARDBP-210ENST00000496840 FAM71DQ8N9W8 422 aa7.03□□□□□ -1.28
TARDBP-210ENST00000496840 CUL5Q93034 780 aa7.03□□□□□ -1.28
TARDBP-210ENST00000496840 SARGQ9BW04 601 aa7.03□□□□□ -1.28
TARDBP-210ENST00000496840 SPRTNQ9H040 489 aaPredicted RBP7.03□□□□□ -1.28
TARDBP-210ENST00000496840 USP29Q9HBJ7 922 aa7.03□□□□□ -1.28
TARDBP-210ENST00000496840 ELOVL5Q9NYP7 299 aa7.03□□□□□ -1.28
TARDBP-210ENST00000496840 PI4KBQ9UBF8 816 aa7.03□□□□□ -1.28
TARDBP-210ENST00000496840 POM121BA6NF01 834 aa7.02□□□□□ -1.29
TARDBP-210ENST00000496840 FGBP02675 491 aa7.02□□□□□ -1.29
TARDBP-210ENST00000496840 SLC5A1P13866 664 aa7.02□□□□□ -1.29
TARDBP-210ENST00000496840 FGFR2P21802 821 aa7.02□□□□□ -1.29
TARDBP-210ENST00000496840 SLC5A2P31639 672 aa7.02□□□□□ -1.29
TARDBP-210ENST00000496840 ATICP31939 592 aa7.02□□□□□ -1.29
TARDBP-210ENST00000496840 THBS4P35443 961 aa7.02□□□□□ -1.29
TARDBP-210ENST00000496840 DGKQP52824 942 aa7.02□□□□□ -1.29
TARDBP-210ENST00000496840 CCDC15Q0P6D6 951 aa7.02□□□□□ -1.29
TARDBP-210ENST00000496840 RRAGBQ5VZM2 374 aa7.02□□□□□ -1.29
TARDBP-210ENST00000496840 GRHL2Q6ISB3 625 aa7.02□□□□□ -1.29
TARDBP-210ENST00000496840 DEF8Q6ZN54 512 aa7.02□□□□□ -1.29
TARDBP-210ENST00000496840 BEND5Q7L4P6 421 aa7.02□□□□□ -1.29
TARDBP-210ENST00000496840 C16orf52Q8NHV5 167 aa7.02□□□□□ -1.29
TARDBP-210ENST00000496840 WDR24Q96S15 920 aa7.02□□□□□ -1.29
TARDBP-210ENST00000496840 TRNAU1APQ9NX07 287 aaKnown RBP7.02□□□□□ -1.29
TARDBP-210ENST00000496840 MYO1AQ9UBC5 1043 aa7.02□□□□□ -1.29
TARDBP-210ENST00000496840 KIF3BO15066 747 aa7.01□□□□□ -1.29
TARDBP-210ENST00000496840 FYB1O15117 783 aa7.01□□□□□ -1.29
TARDBP-210ENST00000496840 CA12O43570 354 aa7.01□□□□□ -1.29
TARDBP-210ENST00000496840 PRAMEF2O60811 474 aa7.01□□□□□ -1.29
TARDBP-210ENST00000496840 MYL4P12829 197 aa7.01□□□□□ -1.29
TARDBP-210ENST00000496840 PLCD1P51178 756 aa7.01□□□□□ -1.29
TARDBP-210ENST00000496840 CFHR1Q03591 330 aa7.01□□□□□ -1.29
TARDBP-210ENST00000496840 SLC14A1Q13336 389 aa7.01□□□□□ -1.29
TARDBP-210ENST00000496840 HLTFQ14527 1009 aaKnown RBP eCLIP7.01□□□□□ -1.29
TARDBP-210ENST00000496840 AASDHQ4L235 1098 aaPredicted RBP7.01□□□□□ -1.29
TARDBP-210ENST00000496840 ABHD5Q8WTS1 349 aa7.01□□□□□ -1.29
TARDBP-210ENST00000496840 AS3MTQ9HBK9 375 aa7.01□□□□□ -1.29
TARDBP-210ENST00000496840 VPS45Q9NRW7 570 aa7.01□□□□□ -1.29
TARDBP-210ENST00000496840 CHPF2Q9P2E5 772 aa7.01□□□□□ -1.29
TARDBP-210ENST00000496840 A0A1W2PPC4 97 aa7□□□□□ -1.29
TARDBP-210ENST00000496840 KPNA5O15131 536 aa7□□□□□ -1.29
TARDBP-210ENST00000496840 CBFA2T3O75081 653 aa7□□□□□ -1.29
TARDBP-210ENST00000496840 BMP15O95972 392 aa7□□□□□ -1.29
TARDBP-210ENST00000496840 MBPP02686 304 aaPredicted RBP7□□□□□ -1.29
TARDBP-210ENST00000496840 IGKV2-30P06310 120 aa7□□□□□ -1.29
TARDBP-210ENST00000496840 TMIGD3P0DMS9 266 aaPredicted RBP7□□□□□ -1.29
TARDBP-210ENST00000496840 ARP10275 920 aa7□□□□□ -1.29
TARDBP-210ENST00000496840 NR4A2P43354 598 aa7□□□□□ -1.29
TARDBP-210ENST00000496840 KCNJ12Q14500 433 aa7□□□□□ -1.29
TARDBP-210ENST00000496840 RABEP1Q15276 862 aa7□□□□□ -1.29
TARDBP-210ENST00000496840 SAFBQ15424 915 aaKnown RBP eCLIP7□□□□□ -1.29
TARDBP-210ENST00000496840 CC2D1BQ5T0F9 858 aaKnown RBP7□□□□□ -1.29
TARDBP-210ENST00000496840 C10orf25Q5T742 122 aa7□□□□□ -1.29
TARDBP-210ENST00000496840 ABLIM2Q6H8Q1 611 aa7□□□□□ -1.29
TARDBP-210ENST00000496840 MRNIPQ6NTE8 343 aa7□□□□□ -1.29
TARDBP-210ENST00000496840 CRTC1Q6UUV9 634 aa7□□□□□ -1.29
TARDBP-210ENST00000496840 UBE2Q1Q7Z7E8 422 aa7□□□□□ -1.29
TARDBP-210ENST00000496840 MRPL10Q7Z7H8 261 aaKnown RBP7□□□□□ -1.29
TARDBP-210ENST00000496840 P3H2Q8IVL5 708 aa7□□□□□ -1.29
TARDBP-210ENST00000496840 C16orf71Q8IYS4 520 aaPredicted RBP7□□□□□ -1.29
TARDBP-210ENST00000496840 SIGLEC11Q96RL6 698 aa7□□□□□ -1.29
TARDBP-210ENST00000496840 MAGEB5Q9BZ81 275 aa7□□□□□ -1.29
TARDBP-210ENST00000496840 RXFP3Q9NSD7 469 aa7□□□□□ -1.29
TARDBP-210ENST00000496840 TMOD4Q9NZQ9 345 aa7□□□□□ -1.29
TARDBP-210ENST00000496840 CCNT2O60583 730 aaKnown RBP6.99□□□□□ -1.29
TARDBP-210ENST00000496840 COQ9O75208 318 aa6.99□□□□□ -1.29
TARDBP-210ENST00000496840 TRIM27P14373 513 aa6.99□□□□□ -1.29
TARDBP-210ENST00000496840 JAK3P52333 1124 aa6.99□□□□□ -1.29
TARDBP-210ENST00000496840 HSF1Q00613 529 aa6.99□□□□□ -1.29
TARDBP-210ENST00000496840 GPS1Q13098 491 aa6.99□□□□□ -1.29
TARDBP-210ENST00000496840 IFIT5Q13325 482 aaKnown RBP6.99□□□□□ -1.29
TARDBP-210ENST00000496840 FAXCQ5TGI0 409 aa6.99□□□□□ -1.29
TARDBP-210ENST00000496840 KLHDC7AQ5VTJ3 777 aa6.99□□□□□ -1.29
TARDBP-210ENST00000496840 NANOGP1Q8N7R0 232 aa6.99□□□□□ -1.29
TARDBP-210ENST00000496840 ZNF366Q8N895 744 aa6.99□□□□□ -1.29
TARDBP-210ENST00000496840 LRRC46Q96FV0 321 aa6.99□□□□□ -1.29
TARDBP-210ENST00000496840 HMCESQ96FZ2 354 aa6.99□□□□□ -1.29
TARDBP-210ENST00000496840 ADGRE3Q9BY15 652 aa6.99□□□□□ -1.29
TARDBP-210ENST00000496840 AFG3L2Q9Y4W6 797 aa6.99□□□□□ -1.29
TARDBP-210ENST00000496840 CNOT3O75175 753 aaKnown RBP6.98□□□□□ -1.29
TARDBP-210ENST00000496840 MST1P26927 711 aa6.98□□□□□ -1.29
TARDBP-210ENST00000496840 TACR3P29371 465 aa6.98□□□□□ -1.29
TARDBP-210ENST00000496840 GALNSP34059 522 aa6.98□□□□□ -1.29
TARDBP-210ENST00000496840 STT3AP46977 705 aa6.98□□□□□ -1.29
TARDBP-210ENST00000496840 PRIM2P49643 509 aa6.98□□□□□ -1.29
TARDBP-210ENST00000496840 SRSF1Q07955 248 aaKnown RBP eCLIP6.98□□□□□ -1.298e-7■□□□□ 10.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms